GIPC2

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GIPC2 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,248 significant associations in total. GBM shows the largest number of these associations.

The most reproducible GIPC2-associated proteins across cancer lineages are CAVIN2, RGN, and DDAH1. Each is linked with GIPC2 in more than 5 cancer types. Because this analysis shows association rather than direction, both GIPC2-to-partner and partner-to-GIPC2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GIPC2 versus CAVIN2 in BRCA, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GIPC2→partner) and Y-score (partner→GIPC2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCACAVIN2 →+0.867+0.596<.001<.00136
BRCARGN →+0.840+0.814<.001<.00135
BRCADDAH1 →+0.602+0.539<.001.00335
GBMALDH1A1 →+0.689+0.273<.001.00535
GBMSRPK2 →-0.361-0.415<.001<.00135
BRCAHAAO →+0.401+0.479<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,248 associations by consensus.

GIPC2 vs CAVIN2 — BRCA

Per-sample scatter of GIPC2 vs CAVIN2 in BRCA (Pearson r = 0.57).

Explore this scatter interactively →

Exploration