GATB

associated omics data
glutamyl-tRNA amidotransferase subunit BGenealiases: COXPD41 · HSPC199 · PET112 · PET112L

Q-omics provides the consensus-scored GATB profile across patient tissues and cancer cell-line models. GATB expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in KIRP. Among the 18 cancer types available for tumor–normal comparison, GATB is differentially expressed in 11, with the highest sampling consensus in THCA. Additionally, GATB RNA expression shows 17,198 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight KIRP, THCA, and UVM as cancer lineages where GATB shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes GATB survival associations across molecular data types. GATB RNA expression shows survival associations in the most cancer types (23), followed by mutation status (7) and mass-spec protein abundance (2). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
GATB data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23KIRP (136)view →
MutationKaplan–Meier7KIRP (43)view →
Protein (mass-spec)Kaplan–Meier2LSCC (26)view →
This table ranks reproducible GATB RNA expression–survival associations across cancer types. High GATB expression shows unfavorable associations in LUAD, KICH, HNSC and CESC, but favorable associations in KIRP and KIRC. The KIRP Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRP as the clearest survival context for GATB RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRPDFSTertileAll0.8260.521<.001136view →
LUADDFSMedianII,III,IV0.3100.584<.00170view →
KIRCOSMedianAll0.7100.553<.00148view →
KICHOSMedianII,III,IV0.5781.000.00146view →
HNSCDFSTertileIII,IV0.2370.358.00145view →
CESCDFSTertileIV0.2780.805.00136view →
Pink = unfavorable, green = favorable. all 23 lineages →

GATB-KIRP (DFS)

Kaplan–Meier survival curve for GATB RNA expression in KIRP: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes GATB tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 11, while mass-spec protein shows differences in 8. The strongest signals are observed in THCA for RNA and CCRCC for protein.
GATB data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot11THCA (11)view →
Protein (mass-spec)Box plot8CCRCC (12)view →
This table ranks reproducible tumor–normal expression differences for GATB. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. GATB shows lower tumor expression in THCA, KICH and BRCA and higher tumor expression in LUAD, LIHC and LUSC. The THCA box plot shows higher GATB RNA expression in normal versus tumor tissue (log2 FC = −0.612, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
THCAAllIV−0.612<.00111view →
LUADMaleAll+0.296<.0017view →
LIHCFemaleAll+0.410<.0015view →
KICHAllAll−0.265.0094view →
LUSCAllAll+0.225.0034view →
BRCAFemaleAll−0.119.0274view →
Green = repressed in tumor. all 11 lineages →

GATB-THCA

Tumor-vs-normal expression box plot for GATB in THCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with GATB in patient tissues and cancer cell lines. In patient samples, GATB shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, GATB RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LIVER, while CRISPR and shRNA rows add functional-dependency signals in OVARY and UPPER_AERODIGESTIVE_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA17,198UVM (7802)view →
Protein (mass-spec)10,217LSCC (2601)view →
Protein (mass-spec)
Protein (mass-spec)12,099LSCC (4702)view →
RNA5,868LSCC (1959)view →
Mutation
RNA1,522UCEC (1368)view →
Protein (RPPA)19UCEC (19)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA2,436LIVER (415)view →
CRISPR2,373OVARY (357)view →
RNA
RNA8,304UPPER_AERODIGESTIVE_TRACT (3186)view →
Function (RNA)2,888BLOOD_Lymphoma (1038)view →
Protein (mass-spec)
RNA1,612LUNG_SCLC (169)view →
Function (RNA)991BLOOD_Lymphoma (136)view →
shRNA
RNA1,238SOFT_TISSUE (386)view →
shRNA1,197SKIN (247)view →