GATB

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, GATB RNA expression is significantly associated with the protein abundance of many other proteins, with 10,217 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible GATB-associated proteins across cancer lineages are HSP90B1, ARFIP1, and TMEM192. Each is linked with GATB in more than 5 cancer types. Because this analysis shows association rather than direction, both GATB-to-partner and partner-to-GATB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, GATB versus HSP90B1 in LUAD, with a Pearson correlation of -0.32.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (GATB→partner) and Y-score (partner→GATB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADHSP90B1 →-0.394-0.213<.001.00436
OVARFIP1 →+0.311+0.534.003.00735
OVTMEM192 →+0.480+0.699<.001<.00135
BRCASPATA5 →+0.229+0.346.002.00435
LSCCNAA15 →+0.243+0.369<.001<.00135
LUADTXNDC5 →-0.431-0.331.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,217 associations by consensus.

GATB vs HSP90B1 — LUAD

Per-sample scatter of GATB vs HSP90B1 in LUAD (Pearson r = -0.32).

Explore this scatter interactively →

Exploration