GAMT

associated omics data
guanidinoacetate N-methyltransferaseGenealiases: CCDS2 · HEL-S-20 · PIG2 · TP53I2

Q-omics provides the consensus-scored GAMT profile across patient tissues and cancer cell-line models. GAMT expression is associated with patient survival in 28 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, GAMT is differentially expressed in 13, with the highest sampling consensus in STAD. Additionally, GAMT protein abundance shows 22,049 significant protein co-abundance associations, with the highest sampling consensus in BRCA. Together, these results highlight ACC, STAD, and BRCA as cancer lineages where GAMT shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes GAMT survival associations across molecular data types. GAMT RNA expression shows survival associations in the most cancer types (28), followed by mutation status (2) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
GAMT data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier28ACC (79)view →
Protein (mass-spec)Kaplan–Meier5CCRCC (52)view →
MutationKaplan–Meier2ESCA (12)view →
This table ranks reproducible GAMT RNA expression–survival associations across cancer types. High GAMT expression shows unfavorable associations in ACC, BLCA, MESO and STAD, but favorable associations in KIRC and LUSC. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for GAMT RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCOSTertileAll0.7370.981<.00179view →
KIRCOSQuartileAll0.7080.517<.00173view →
LUSCOSMedianAll0.8110.711.00471view →
BLCAOSTertileIV0.1580.450.00249view →
MESOOSTertileIV0.3050.863.00146view →
STADOSQuartileAll0.3110.526<.00134view →
Pink = unfavorable, green = favorable. all 28 lineages →

GAMT-ACC (OS)

Kaplan–Meier survival curve for GAMT RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes GAMT tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13, while mass-spec protein shows differences in 7. The strongest signals are observed in STAD for RNA and HNSC for protein.
GAMT data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13STAD (10)view →
Protein (mass-spec)Box plot7HNSC (11)view →
This table ranks reproducible tumor–normal expression differences for GAMT. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. GAMT shows lower tumor expression in STAD, BLCA and KICH and higher tumor expression in LUAD, KIRC and LUSC. The STAD box plot shows higher GAMT RNA expression in normal versus tumor tissue (log2 FC = −1.896, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
STADMaleIII,IV−1.896<.00110view →
BLCAAllIV−1.884<.0019view →
LUADAllIII,IV+1.084<.0019view →
KICHFemaleII,III,IV−2.704<.0018view →
KIRCMaleIII,IV+1.144<.0018view →
LUSCFemaleII,III,IV+1.458<.0017view →
Green = repressed in tumor. all 13 lineages →

GAMT-STAD

Tumor-vs-normal expression box plot for GAMT in STAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with GAMT in patient tissues and cancer cell lines. In patient samples, GAMT shows the broadest associations at the RNA and protein expression levels, with BRCA recurring as the lineage with the largest associated feature set. In cancer cell lines, GAMT RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BONE, while CRISPR and shRNA rows add functional-dependency signals in STOMACH and SKIN.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)22,049BRCA (6522)view →
RNA16,341BRCA (8205)view →
RNA
Protein (mass-spec)18,735BRCA (5930)view →
RNA18,357TGCT (5719)view →
Mutation
RNA97UCEC (78)view →
Infiltrating cells1COAD (1)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,908BONE (151)view →
RNA1,531STOMACH (243)view →
RNA
RNA10,520BONE (3683)view →
Function (RNA)4,615BONE (1709)view →
shRNA
shRNA1,878SKIN (183)view →
RNA1,700BLOOD_Leukemia (294)view →
Protein (mass-spec)
RNA734SOFT_TISSUE (201)view →
Function (RNA)467SOFT_TISSUE (79)view →