FARSA

associated omics data
phenylalanyl-tRNA synthetase subunit alphaGenealiases: CML33 · FARSL · FARSLA · FRSA · PheHA · RILDBC2

Q-omics provides the consensus-scored FARSA profile across patient tissues and cancer cell-line models. FARSA expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, FARSA is differentially expressed in 16, with the highest sampling consensus in COAD. Additionally, FARSA RNA expression shows 19,061 significant gene co-expression associations, with the highest sampling consensus in ACC. Together, these results highlight ACC, and COAD as cancer lineages where FARSA shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes FARSA survival associations across molecular data types. FARSA RNA expression shows survival associations in the most cancer types (25), followed by mutation status (7) and mass-spec protein abundance (8). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
FARSA data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25ACC (74)view →
Protein (mass-spec)Kaplan–Meier8COAD (24)view →
MutationKaplan–Meier7OV (18)view →
This table ranks reproducible FARSA RNA expression–survival associations across cancer types. High FARSA expression shows unfavorable associations in ACC, LUAD, BLCA and KICH, but favorable associations in LUSC and CESC. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for FARSA RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCDFSMedianAll0.3510.810<.00174view →
LUSCDFSQuartileAll0.4890.274<.00163view →
LUADDFSMedianIII,IV0.1780.471.00258view →
BLCADFSQuartileIII,IV0.1900.379.00653view →
KICHOSQuartileAll0.5131.000.00952view →
CESCDFSTertileII,III,IV0.7120.224.00344view →
Pink = unfavorable, green = favorable. all 25 lineages →

FARSA-ACC (DFS)

Kaplan–Meier survival curve for FARSA RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes FARSA tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 16, while mass-spec protein shows differences in 6. The strongest signals are observed in HNSC for RNA and LUAD for protein.
FARSA data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot16HNSC (11)view →
Protein (mass-spec)Box plot6LUAD (9)view →
This table ranks reproducible tumor–normal expression differences for FARSA. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. FARSA shows higher tumor expression in COAD, HNSC, KIRP, STAD, LIHC and BLCA. The COAD box plot shows higher FARSA RNA expression in tumor versus normal tissue (log2 FC = +1.307, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV+1.307<.00111view →
HNSCMaleAll+0.887<.00111view →
KIRPFemaleII,III,IV+0.828<.00110view →
STADAllIII,IV+1.301<.0019view →
LIHCMaleII,III,IV+1.093<.0019view →
BLCAMaleAll+0.926<.0019view →
Green = repressed in tumor. all 16 lineages →

FARSA-COAD

Tumor-vs-normal expression box plot for FARSA in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with FARSA in patient tissues and cancer cell lines. In patient samples, FARSA shows the broadest associations at the RNA and protein expression levels, with ACC recurring as the lineage with the largest associated feature set. In cancer cell lines, FARSA RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BLOOD_Lymphoma, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Leukemia and BONE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA19,061ACC (10424)view →
Protein (mass-spec)17,110LSCC (9867)view →
Protein (mass-spec)
Protein (mass-spec)15,428PDAC (5551)view →
RNA9,602GBM (3934)view →
Mutation
RNA914UCEC (702)view →
Protein (RPPA)13UCEC (11)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,964BLOOD_Lymphoma (155)view →
shRNA1,312BLOOD_Lymphoma (169)view →
RNA
RNA9,856BLOOD_Lymphoma (4246)view →
Function (RNA)4,334BLOOD_Lymphoma (1353)view →
Protein (mass-spec)
RNA4,813BLOOD_Leukemia (1348)view →
Function (mass-spec)3,515BONE (1154)view →
Mutation
Mutation3,963BLOOD_Leukemia (2246)view →
RNA32BLOOD_Leukemia (16)view →