FARSA

Across TCGA cell cohorts, FARSA RNA expression is significantly associated with the go_rna of many other GO terms, with 4,334 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible FARSA-associated GO terms across cancer lineages are rRNA processing, rRNA metabolic process, and Ribosome biogenesis. Each is linked with FARSA in more than 16 cancer types. Because this analysis shows association rather than direction, both FARSA-to-partner and partner-to-FARSA results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, rRNA processing grouped by FARSA-low versus FARSA-high in BLOOD_Lymphoma.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (FARSA→partner) and Y-score (partner→FARSA) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BLOOD_Lymphoma	rRNA processing →	+0.118	+1.054	<.001	<.001	3	17
BLOOD_Lymphoma	rRNA metabolic process →	+0.113	+1.018	<.001	<.001	3	17
BONE	Ribosome biogenesis →	+0.133	+1.039	<.001	<.001	3	17
URINARY_TRACT	Maturation of 5.8S rRNA →	+0.117	+1.266	<.001	<.001	3	16
BONE	snRNA transcription by RNA polymerase III →	+0.095	+1.203	<.001	<.001	3	16
PANCREAS	DNA replication initiation →	+0.187	+0.951	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,334 associations by consensus.

rRNA processing by FARSA expression — BLOOD_Lymphoma

Explore this box plot interactively →