EAF2

associated omics data
ELL associated factor 2Genealiases: BM040 · TRAITS · U19

Q-omics provides the consensus-scored EAF2 profile across patient tissues and cancer cell-line models. EAF2 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in SKCM. Among the 18 cancer types available for tumor–normal comparison, EAF2 is differentially expressed in 16, with the highest sampling consensus in KIRP. Additionally, EAF2 RNA expression shows 18,230 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight SKCM, KIRP, and UVM as cancer lineages where EAF2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes EAF2 survival associations across molecular data types. EAF2 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (2). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
EAF2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25SKCM (125)view →
MutationKaplan–Meier2UCEC (6)view →
This table ranks reproducible EAF2 RNA expression–survival associations across cancer types. High EAF2 expression shows unfavorable associations in LIHC, but favorable associations in SKCM, CESC, UCEC, HNSC and LUAD. The SKCM Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify SKCM as the clearest survival context for EAF2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
SKCMOSMedianAll0.4410.224<.001125view →
CESCOSMedianAll0.6710.481<.00190view →
UCECOSQuartileIII,IV0.7770.371.00266view →
LIHCOSTertileAll0.5810.763<.00152view →
HNSCDFSQuartileAll0.8010.622.00148view →
LUADDFSTertileAll0.4170.267.00545view →
Pink = unfavorable, green = favorable. all 25 lineages →

EAF2-SKCM (OS)

Kaplan–Meier survival curve for EAF2 RNA expression in SKCM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes EAF2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 16, while mass-spec protein shows differences in 2. The strongest signals are observed in HNSC for RNA and CCRCC for protein.
EAF2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot16HNSC (11)view →
Protein (mass-spec)Box plot2CCRCC (12)view →
This table ranks reproducible tumor–normal expression differences for EAF2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. EAF2 shows lower tumor expression in KIRP, COAD, KICH and THCA and higher tumor expression in HNSC and LIHC. The KIRP box plot shows higher EAF2 RNA expression in normal versus tumor tissue (log2 FC = −2.088, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRPFemaleII,III,IV−2.088<.00111view →
HNSCMaleIII,IV+0.964<.00111view →
COADMaleAll−0.919<.00110view →
KICHMaleII,III,IV−2.385<.0019view →
THCAMaleAll−0.758<.0017view →
LIHCAllAll+0.433<.0017view →
Green = repressed in tumor. all 16 lineages →

EAF2-KIRP

Tumor-vs-normal expression box plot for EAF2 in KIRP.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with EAF2 in patient tissues and cancer cell lines. In patient samples, EAF2 shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, EAF2 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in OVARY, while CRISPR and shRNA rows add functional-dependency signals in BREAST and BLOOD_Lymphoma.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA18,230UVM (7760)view →
Protein (mass-spec)10,015LSCC (2330)view →
Protein (mass-spec)
RNA1,490LSCC (1345)view →
Protein (mass-spec)1,195LSCC (701)view →
Mutation
RNA853UCEC (820)view →
Protein (RPPA)22UCEC (22)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,724OVARY (156)view →
RNA1,534BREAST (480)view →
RNA
RNA10,421BLOOD_Lymphoma (3319)view →
Function (RNA)4,755BLOOD_Lymphoma (1614)view →
shRNA
RNA1,978LUNG_SCLC (630)view →
shRNA1,849BLOOD_Leukemia (207)view →
Mutation
Mutation1,901LARGE_INTESTINE (1320)view →
RNA9OVARY (4)view →