CHRNB2

associated omics data
cholinergic receptor nicotinic beta 2 subunitGenealiases: EFNL3 · nAChRB2

Q-omics provides the consensus-scored CHRNB2 profile across patient tissues and cancer cell-line models. CHRNB2 expression is associated with patient survival in 19 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, CHRNB2 is differentially expressed in 13, with the highest sampling consensus in KICH. Additionally, CHRNB2 RNA expression shows 18,278 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight UVM, KICH, and GBM as cancer lineages where CHRNB2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CHRNB2 survival associations across molecular data types. CHRNB2 RNA expression shows survival associations in the most cancer types (19), followed by mutation status (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CHRNB2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier19UVM (115)view →
MutationKaplan–Meier5PAAD (24)view →
This table ranks reproducible CHRNB2 RNA expression–survival associations across cancer types. High CHRNB2 expression shows unfavorable associations in SKCM, COAD and DLBC, but favorable associations in UVM, LGG and PAAD. The UVM Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify UVM as the clearest survival context for CHRNB2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMOSTertileII,III,IV0.8690.351<.001115view →
SKCMOSMedianII,III,IV0.3020.369.00163view →
COADDFSTertileIV0.2760.575.00161view →
LGGDFSMedianAll0.8110.660<.00150view →
PAADDFSQuartileAll0.6010.254.00330view →
DLBCDFSQuartileAll0.3660.837.00219view →
Pink = unfavorable, green = favorable. all 19 lineages →

CHRNB2-UVM (OS)

Kaplan–Meier survival curve for CHRNB2 RNA expression in UVM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CHRNB2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13. The strongest signals are observed in KICH for RNA.
CHRNB2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13KICH (7)view →
This table ranks reproducible tumor–normal expression differences for CHRNB2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CHRNB2 shows lower tumor expression in KICH, HNSC and BRCA and higher tumor expression in LUSC, KIRP and LIHC. The KICH box plot shows higher CHRNB2 RNA expression in normal versus tumor tissue (log2 FC = −0.344, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KICHFemaleAll−0.344<.0017view →
LUSCMaleII,III,IV+0.923<.0016view →
KIRPAllAll+0.491<.0016view →
HNSCFemaleAll−0.235.0015view →
LIHCAllAll+0.080<.0015view →
BRCAFemaleAll−0.334.0094view →
Green = repressed in tumor. all 13 lineages →

CHRNB2-KICH

Tumor-vs-normal expression box plot for CHRNB2 in KICH.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with CHRNB2 in patient tissues and cancer cell lines. In patient samples, CHRNB2 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set. In cancer cell lines, CHRNB2 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in CNS, while CRISPR and shRNA rows add functional-dependency signals in PANCREAS and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)18,278GBM (9082)view →
RNA17,210TGCT (6512)view →
Mutation
RNA1,766UCEC (1363)view →
Protein (RPPA)30UCEC (30)view →
Protein (mass-spec)
Protein (mass-spec)590GBM (590)view →
RNA215GBM (215)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,892CNS (143)view →
shRNA1,239PANCREAS (115)view →
RNA
RNA9,926BLOOD_Leukemia (4460)view →
Function (RNA)3,749BONE (1592)view →
Mutation
Mutation2,154LARGE_INTESTINE (1839)view →
RNA18LARGE_INTESTINE (14)view →
shRNA
RNA2,064LARGE_INTESTINE (681)view →
shRNA1,638LARGE_INTESTINE (247)view →