CASC3

associated omics data
CASC3 exon junction complex subunitGenealiases: BTZ · MLN51

Q-omics provides the consensus-scored CASC3 profile across patient tissues and cancer cell-line models. CASC3 expression is associated with patient survival in 28 of 34 cancer types, with the highest sampling consensus in UCS. Among the 18 cancer types available for tumor–normal comparison, CASC3 is differentially expressed in 13, with the highest sampling consensus in LIHC. Additionally, CASC3 protein abundance shows 25,584 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight UCS, LIHC, and LSCC as cancer lineages where CASC3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CASC3 survival associations across molecular data types. CASC3 RNA expression shows survival associations in the most cancer types (28), followed by mutation status (4) and mass-spec protein abundance (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CASC3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier28UCS (68)view →
Protein (mass-spec)Kaplan–Meier6PDAC (9)view →
MutationKaplan–Meier4UCEC (12)view →
This table ranks reproducible CASC3 RNA expression–survival associations across cancer types. High CASC3 expression shows unfavorable associations in ACC, LIHC and KICH, but favorable associations in UCS, READ and KIRC. The UCS Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .002). Together, the overview and detailed table identify UCS as the clearest survival context for CASC3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UCSOSMedianIV0.8170.302.00268view →
ACCDFSTertileAll0.1570.723<.00159view →
LIHCDFSTertileAll0.4210.626<.00145view →
READOSQuartileAll0.8970.307.00135view →
KIRCDFSMedianAll0.7340.520.00229view →
KICHDFSMedianII,III,IV0.5750.920.00628view →
Pink = unfavorable, green = favorable. all 28 lineages →

CASC3-UCS (OS)

Kaplan–Meier survival curve for CASC3 RNA expression in UCS: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CASC3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13, while mass-spec protein shows differences in 6. The strongest signals are observed in LIHC for RNA and COAD for protein.
CASC3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13LIHC (9)view →
Protein (mass-spec)Box plot6COAD (11)view →
This table ranks reproducible tumor–normal expression differences for CASC3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CASC3 shows lower tumor expression in KICH and THCA and higher tumor expression in LIHC, HNSC, COAD and CHOL. The LIHC box plot shows higher CASC3 RNA expression in tumor versus normal tissue (log2 FC = +1.447, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LIHCFemaleII,III,IV+1.447<.0019view →
HNSCMaleIII,IV+0.683<.0019view →
KICHFemaleAll−1.455<.0018view →
THCAMaleAll−0.611<.0018view →
COADAllII,III,IV+0.312.0036view →
CHOLAllAll+2.213<.0015view →
Green = repressed in tumor. all 13 lineages →

CASC3-LIHC

Tumor-vs-normal expression box plot for CASC3 in LIHC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with CASC3 in patient tissues and cancer cell lines. In patient samples, CASC3 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, CASC3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in OVARY, while CRISPR and shRNA rows add functional-dependency signals in URINARY_TRACT and BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)25,584LSCC (10348)view →
RNA12,762LSCC (8219)view →
RNA
RNA20,564ACC (10048)view →
Protein (mass-spec)19,427LSCC (9448)view →
Mutation
RNA2,624UCEC (2500)view →
Protein (RPPA)28UCEC (28)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,995OVARY (174)view →
RNA1,818URINARY_TRACT (385)view →
RNA
RNA11,508BLOOD_Leukemia (6512)view →
Function (RNA)4,283BLOOD_Leukemia (1780)view →
Mutation
Mutation3,289BLOOD_Leukemia (2142)view →
RNA23BLOOD_Leukemia (21)view →
shRNA
RNA1,448SOFT_TISSUE (415)view →
CRISPR1,202BLOOD_Leukemia (149)view →