ARID2

associated omics data
AT-rich interaction domain 2Genealiases: BAF200 · CSS6 · SMARCF3 · ZIPZAP · p200

Q-omics provides the consensus-scored ARID2 profile across patient tissues and cancer cell-line models. ARID2 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, ARID2 is differentially expressed in 13, with the highest sampling consensus in LIHC. Additionally, ARID2 protein abundance shows 25,803 significant protein co-abundance associations, with the highest sampling consensus in LSCC. Together, these results highlight KIRC, LIHC, and LSCC as cancer lineages where ARID2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes ARID2 survival associations across molecular data types. ARID2 RNA expression shows survival associations in the most cancer types (25), followed by mutation status (11) and mass-spec protein abundance (4). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
ARID2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25KIRC (77)view →
MutationKaplan–Meier11THYM (42)view →
Protein (mass-spec)Kaplan–Meier4LSCC (28)view →
This table ranks reproducible ARID2 RNA expression–survival associations across cancer types. High ARID2 expression shows unfavorable associations in LIHC, but favorable associations in KIRC, HNSC, GBM, THYM and UCS. The KIRC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .001). Together, the overview and detailed table identify KIRC as the clearest survival context for ARID2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSTertileAll0.7340.469.00177view →
HNSCDFSQuartileAll0.8190.628<.00149view →
LIHCDFSQuartileAll0.3990.599<.00145view →
GBMOSMedianAll0.5590.263<.00122view →
THYMOSTertileAll1.0000.710.00422view →
UCSDFSTertileIV0.9750.361.02420view →
Pink = unfavorable, green = favorable. all 25 lineages →

ARID2-KIRC (DFS)

Kaplan–Meier survival curve for ARID2 RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes ARID2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 13, while mass-spec protein shows differences in 5. The strongest signals are observed in LIHC for RNA and CCRCC for protein.
ARID2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot13LIHC (8)view →
Protein (mass-spec)Box plot5CCRCC (10)view →
This table ranks reproducible tumor–normal expression differences for ARID2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. ARID2 shows lower tumor expression in THCA and higher tumor expression in LIHC, HNSC, BRCA, CHOL and LUSC. The LIHC box plot shows higher ARID2 RNA expression in tumor versus normal tissue (log2 FC = +0.933, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LIHCFemaleII,III,IV+0.933<.0018view →
THCAAllAll−0.354<.0017view →
HNSCAllAll+0.485<.0016view →
BRCAAllII,III,IV+0.462<.0016view →
CHOLAllAll+2.056<.0015view →
LUSCAllII,III,IV+0.548<.0015view →
Green = repressed in tumor. all 13 lineages →

ARID2-LIHC

Tumor-vs-normal expression box plot for ARID2 in LIHC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with ARID2 in patient tissues and cancer cell lines. In patient samples, ARID2 shows the broadest associations at the RNA and protein expression levels, with LSCC recurring as the lineage with the largest associated feature set. In cancer cell lines, ARID2 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in OVARY, while CRISPR and shRNA rows add functional-dependency signals in BONE and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)25,803LSCC (10307)view →
RNA17,030LSCC (9918)view →
RNA
RNA21,345UVM (9355)view →
Protein (mass-spec)20,348GBM (7584)view →
Mutation
RNA7,266UCEC (5382)view →
Protein (RPPA)89UCEC (42)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,891OVARY (140)view →
RNA1,438BONE (140)view →
RNA
RNA13,153LARGE_INTESTINE (5403)view →
Function (RNA)5,588BONE (1877)view →
Mutation
Mutation6,249LARGE_INTESTINE (5462)view →
RNA1,359LARGE_INTESTINE (1337)view →
Protein (mass-spec)
RNA2,283LUNG_SCLC (628)view →
shRNA1,424BREAST (196)view →