APOC4-APOC2

associated omics data
APOC4-APOC2 readthrough (NMD candidate)Genealiases: []

Q-omics provides the consensus-scored APOC4-APOC2 profile across patient tissues and cancer cell-line models. APOC4-APOC2 expression is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, APOC4-APOC2 is differentially expressed in 14, with the highest sampling consensus in LUAD. Additionally, APOC4-APOC2 RNA expression shows 10,918 significant gene co-expression associations, with the highest sampling consensus in UVM. Together, these results highlight ACC, LUAD, and UVM as cancer lineages where APOC4-APOC2 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes APOC4-APOC2 survival associations across molecular data types. APOC4-APOC2 RNA expression shows survival associations in the most cancer types (25). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
APOC4-APOC2 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier25ACC (58)view →
This table ranks reproducible APOC4-APOC2 RNA expression–survival associations across cancer types. High APOC4-APOC2 expression shows unfavorable associations in ACC, LGG, KIRC and KICH, but favorable associations in BLCA and LUAD. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for APOC4-APOC2 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCOSMedianAll0.7740.955<.00158view →
LGGOSMedianAll0.3580.528<.00153view →
BLCAOSQuartileAll0.7970.164<.00152view →
KIRCOSMedianAll0.5610.688.00330view →
LUADOSMedianAll0.8610.763<.00130view →
KICHOSTertileII,III,IV0.8861.000.01427view →
Pink = unfavorable, green = favorable. all 25 lineages →

APOC4-APOC2-ACC (OS)

Kaplan–Meier survival curve for APOC4-APOC2 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes APOC4-APOC2 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 14. The strongest signals are observed in THCA for RNA.
APOC4-APOC2 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot14THCA (9)view →
This table ranks reproducible tumor–normal expression differences for APOC4-APOC2. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. APOC4-APOC2 shows lower tumor expression in LUAD and CHOL and higher tumor expression in THCA, HNSC, LIHC and BRCA. The LUAD box plot shows higher APOC4-APOC2 RNA expression in normal versus tumor tissue (log2 FC = −0.623, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUADMaleIII,IV−0.623<.0019view →
THCAAllII,III,IV+0.115<.0019view →
HNSCMaleIII,IV+0.071.0018view →
LIHCMaleAll+0.830<.0016view →
BRCAFemaleAll+0.122<.0016view →
CHOLFemaleAll−3.783<.0015view →
Green = repressed in tumor. all 14 lineages →

APOC4-APOC2-LUAD

Tumor-vs-normal expression box plot for APOC4-APOC2 in LUAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with APOC4-APOC2 in patient tissues and cancer cell lines. In patient samples, APOC4-APOC2 shows the broadest associations at the RNA and protein expression levels, with UVM recurring as the lineage with the largest associated feature set. In cancer cell lines, APOC4-APOC2 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in SKIN, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA10,918UVM (2262)view →
Function (RNA)7,095LGG (3584)view →
Mutation
RNA13SKCM (13)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
shRNA
shRNA1,833SKIN (254)view →
RNA1,323BLOOD_Leukemia (189)view →
Mutation
Mutation180BLOOD_Leukemia (180)view →