Regulation of type B pancreatic cell development

associated omics data
GO:2000074Ontology (GO BP)GO biological process · ~8 member genes

Q-omics provides the Regulation of type B pancreatic cell development (GO:2000074) pathway profile, scoring each patient from the combined activity of its roughly 8 member genes. Pathway activity is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in BLCA. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 9, with the highest sampling consensus in HNSC. Additionally, pathway RNA activity shows 35,717 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight BLCA, HNSC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Regulation of type B pancreatic cell development survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (21). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier21BLCA (58)view →
GO function (Protein (mass-spec))Kaplan–Meier4PDAC (16)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Regulation of type B pancreatic cell development activity shows favorable associations in COAD, HNSC and MESO, but unfavorable associations in BLCA, READ and SCLC. In the BLCA Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). BLCA ranks highest by sampling consensus for Regulation of type B pancreatic cell development.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BLCADFSMedianII,III,IV0.4280.585<.00158view →
READOSTertileII,III,IV0.7640.955.00144view →
COADDFSTertileII,III,IV0.8570.567.00144view →
HNSCDFSMedianAll0.7650.646<.00138view →
MESOOSQuartileAll0.7090.466.00325view →
SCLCDFSQuartileAll0.2171.000.00325view →
Pink = unfavorable, green = favorable. all 21 lineages →

Regulation of type B pancreatic cell development-BLCA (DFS)

Kaplan–Meier survival curve for Regulation of type B pancreatic cell development pathway activity in BLCA: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Regulation of type B pancreatic cell development tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 9 cancer types, while mass-spec protein activity shows differences in 3. The strongest signals are in KIRC for RNA and COAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot9KIRC (7)view →
GO function (Protein (mass-spec))Box plot3COAD (9)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across LUSC, KICH and PAAD and lower tumor activity in HNSC, KIRC and ESCA. In the HNSC box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.040, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleII,III,IV−0.040<.0017view →
KIRCMaleIII,IV−0.033<.0017view →
LUSCFemaleAll+0.072<.0015view →
KICHFemaleAll+0.070<.0015view →
ESCAAllAll−0.087.0082view →
PAADMaleAll+0.070.0382view →
Pink = higher activity in tumor. all 9 lineages →

Regulation of type B pancreatic cell development-HNSC

Tumor-vs-normal pathway-activity box plot for Regulation of type B pancreatic cell development in HNSC.

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Cross-omics associations

This table shows molecular features associated with Regulation of type B pancreatic cell development pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA35,717STAD (19028)view →
Protein (mass-spec)9,158LUAD (2274)view →
Protein (mass-spec)
Protein (mass-spec)13,689UCEC (2312)view →
RNA2,770UCEC (1230)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA3,269BLOOD_Leukemia (678)view →
CRISPR1,932BLOOD_Leukemia (182)view →
RNA
RNA6,636BLOOD_Leukemia (1422)view →
CRISPR1,898LARGE_INTESTINE (155)view →
Protein (mass-spec)
RNA1,879BLOOD_Leukemia (529)view →
CRISPR1,262KIDNEY (145)view →
shRNA
RNA1,392CNS (357)view →
shRNA1,296SOFT_TISSUE (169)view →