Positive regulation of muscle tissue development

associated omics data
GO:1901863Ontology (GO BP)GO biological process · ~24 member genes

Q-omics provides the Positive regulation of muscle tissue development (GO:1901863) pathway profile, scoring each patient from the combined activity of its roughly 24 member genes. Pathway activity is associated with patient survival in 21 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 12, with the highest sampling consensus in COAD. Additionally, pathway RNA activity shows 35,710 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight KIRC, COAD, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Positive regulation of muscle tissue development survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (21). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier21KIRC (122)view →
GO function (Protein (mass-spec))Kaplan–Meier6PDAC (24)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Positive regulation of muscle tissue development activity shows favorable associations in KIRC, HNSC, LIHC and UCS, but unfavorable associations in UVM and LGG. In the KIRC Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). KIRC ranks highest by sampling consensus for Positive regulation of muscle tissue development.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSMedianAll0.7290.551<.001122view →
HNSCDFSQuartileII,III,IV0.4690.267.01161view →
LIHCOSMedianII,III,IV0.8150.618.00149view →
UCSDFSQuartileIII,IV0.6910.284.00546view →
UVMOSMedianIII,IV0.3570.860.00438view →
LGGDFSMedianAll0.7750.897.00133view →
Pink = unfavorable, green = favorable. all 21 lineages →

Positive regulation of muscle tissue development-KIRC (OS)

Kaplan–Meier survival curve for Positive regulation of muscle tissue development pathway activity in KIRC: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Positive regulation of muscle tissue development tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 12 cancer types, while mass-spec protein activity shows differences in 4. The strongest signals are in COAD for RNA and HNSC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot12COAD (10)view →
GO function (Protein (mass-spec))Box plot4HNSC (8)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows consistently lower tumor activity across COAD, UCEC, THCA, KICH, BRCA and LUAD. In the COAD box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.086, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADMaleIII,IV−0.086<.00110view →
UCECAllAll−0.149<.0018view →
THCAMaleII,III,IV−0.101<.0018view →
KICHAllII,III,IV−0.056<.0018view →
BRCAAllIII,IV−0.072<.0016view →
LUADFemaleII,III,IV−0.069<.0016view →
Pink = higher activity in tumor. all 12 lineages →

Positive regulation of muscle tissue development-COAD

Tumor-vs-normal pathway-activity box plot for Positive regulation of muscle tissue development in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with Positive regulation of muscle tissue development pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in UPPER_AERODIGESTIVE_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA35,710STAD (22855)view →
Protein (mass-spec)15,782CCRCC (4295)view →
Protein (mass-spec)
Protein (mass-spec)19,871LUAD (5804)view →
RNA7,490LSCC (4848)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA3,928UPPER_AERODIGESTIVE_TRACT (2125)view →
CRISPR1,745LIVER (183)view →
RNA
RNA5,050BONE (832)view →
CRISPR1,931OVARY (175)view →
Protein (mass-spec)
RNA1,692BREAST (238)view →
CRISPR1,520LUNG_NSCLC_LUSC (155)view →
shRNA
RNA1,514LARGE_INTESTINE (272)view →
shRNA1,377SKIN (197)view →