Cellular detoxification of aldehyde

associated omics data
GO:0110095Ontology (GO BP)GO biological process · ~9 member genes

Q-omics provides the Cellular detoxification of aldehyde (GO:0110095) pathway profile, scoring each patient from the combined activity of its roughly 9 member genes. Pathway activity is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 12, with the highest sampling consensus in LUAD. Additionally, pathway RNA activity shows 35,365 significant cross-omics associations, again with the highest sampling consensus in KIRC. Together, these results highlight BRCA, LUAD, and KIRC as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Cellular detoxification of aldehyde survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (22). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier22BRCA (100)view →
GO function (Protein (mass-spec))Kaplan–Meier6LUAD (29)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Cellular detoxification of aldehyde activity shows favorable associations in BRCA, SKCM, KICH, LUSC, SARC and MESO. In the BRCA Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). BRCA ranks highest by sampling consensus for Cellular detoxification of aldehyde.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCAOSMedianAll0.9520.895<.001100view →
SKCMOSQuartileII,III,IV0.5490.278.00828view →
KICHDFSMedianII,III,IV1.0000.613.01125view →
LUSCOSQuartileII,III,IV0.9500.581.00822view →
SARCOSTertileAll0.9380.758<.00122view →
MESOOSTertileII,III,IV0.7870.278.01218view →
Pink = unfavorable, green = favorable. all 22 lineages →

Cellular detoxification of aldehyde-BRCA (OS)

Kaplan–Meier survival curve for Cellular detoxification of aldehyde pathway activity in BRCA: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Cellular detoxification of aldehyde tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 12 cancer types, while mass-spec protein activity shows differences in 5. The strongest signals are in LUAD for RNA and COAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot12LUAD (8)view →
GO function (Protein (mass-spec))Box plot5COAD (11)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KIRP and lower tumor activity in LUAD, COAD, UCEC, READ and THCA. In the LUAD box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.105, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUADFemaleIII,IV−0.105<.0018view →
COADFemaleAll−0.088<.0018view →
UCECAllIII,IV−0.113<.0016view →
KIRPAllII,III,IV+0.060.0016view →
READAllII,III,IV−0.090.0015view →
THCAAllAll−0.027<.0015view →
Pink = higher activity in tumor. all 12 lineages →

Cellular detoxification of aldehyde-LUAD

Tumor-vs-normal pathway-activity box plot for Cellular detoxification of aldehyde in LUAD.

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Cross-omics associations

This table shows molecular features associated with Cellular detoxification of aldehyde pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in KIRC. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in LUNG_NSCLC_LUAD.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA35,365KIRC (16160)view →
Protein (mass-spec)9,213GBM (2338)view →
Protein (mass-spec)
Protein (mass-spec)15,709GBM (5452)view →
RNA4,329COAD (1098)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,238LUNG_NSCLC_LUAD (199)view →
RNA1,682LIVER (277)view →
RNA
RNA6,892BLOOD_Leukemia (1979)view →
CRISPR1,888UPPER_AERODIGESTIVE_TRACT (149)view →
Protein (mass-spec)
Protein (mass-spec)2,552CNS (989)view →
RNA2,505LIVER (394)view →
shRNA
shRNA1,450CNS (256)view →
CRISPR1,163CNS (136)view →