Negative regulation of monocyte chemotactic protein-1 production

associated omics data
GO:0071638Ontology (GO BP)GO biological process · ~6 member genes

Q-omics provides the Negative regulation of monocyte chemotactic protein-1 production (GO:0071638) pathway profile, scoring each patient from the combined activity of its roughly 6 member genes. Pathway activity is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in BLCA. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 14, with the highest sampling consensus in KICH. Additionally, pathway RNA activity shows 34,407 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight BLCA, KICH, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Negative regulation of monocyte chemotactic protein-1 production survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (25). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier25BLCA (55)view →
GO function (Protein (mass-spec))Kaplan–Meier4CCRCC (20)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Negative regulation of monocyte chemotactic protein-1 production activity shows favorable associations in LUSC, UCS and LAML, but unfavorable associations in BLCA, OV and KICH. In the BLCA Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p = .006). BLCA ranks highest by sampling consensus for Negative regulation of monocyte chemotactic protein-1 production.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BLCAOSQuartileIII,IV0.2130.494.00655view →
OVOSMedianII,III,IV0.2800.368.00244view →
LUSCDFSMedianIII,IV0.4630.190.00241view →
KICHOSMedianIII,IV0.1250.815<.00128view →
UCSDFSMedianII,III,IV0.5950.272.00524view →
LAMLDFSQuartileAll0.9030.405.00122view →
Pink = unfavorable, green = favorable. all 25 lineages →

Negative regulation of monocyte chemotactic protein-1 production-BLCA (OS)

Kaplan–Meier survival curve for Negative regulation of monocyte chemotactic protein-1 production pathway activity in BLCA: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Negative regulation of monocyte chemotactic protein-1 production tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 14 cancer types, while mass-spec protein activity shows differences in 4. The strongest signals are in KICH for RNA and PDAC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot14KICH (11)view →
GO function (Protein (mass-spec))Box plot4PDAC (5)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across LIHC and lower tumor activity in KICH, COAD, KIRC, UCEC and THCA. In the KICH box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.175, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KICHAllIII,IV−0.175<.00111view →
COADFemaleII,III,IV−0.082<.00110view →
KIRCMaleIII,IV−0.072<.0019view →
UCECAllAll−0.092<.0016view →
THCAFemaleAll−0.067<.0016view →
LIHCMaleAll+0.045<.0016view →
Pink = higher activity in tumor. all 14 lineages →

Negative regulation of monocyte chemotactic protein-1 production-KICH

Tumor-vs-normal pathway-activity box plot for Negative regulation of monocyte chemotactic protein-1 production in KICH.

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Cross-omics associations

This table shows molecular features associated with Negative regulation of monocyte chemotactic protein-1 production pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in KIDNEY.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA34,407STAD (18319)view →
Protein (mass-spec)20,533PDAC (5994)view →
Protein (mass-spec)
Protein (mass-spec)12,325GBM (2790)view →
RNA2,714BRCA (1427)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR918KIDNEY (96)view →
RNA720SOFT_TISSUE (204)view →
RNA
RNA6,074SKIN (1426)view →
CRISPR1,737BONE (157)view →
shRNA
RNA2,282BREAST (690)view →
shRNA2,014BREAST (294)view →