Actin polymerization-dependent cell motility

associated omics data
GO:0070358Ontology (GO BP)GO biological process · ~7 member genes

Q-omics provides the Actin polymerization-dependent cell motility (GO:0070358) pathway profile, scoring each patient from the combined activity of its roughly 7 member genes. Pathway activity is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in MESO. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 11, with the highest sampling consensus in HNSC. Additionally, pathway RNA activity shows 36,105 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight MESO, HNSC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Actin polymerization-dependent cell motility survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier24MESO (69)view →
GO function (Protein (mass-spec))Kaplan–Meier4PDAC (18)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Actin polymerization-dependent cell motility activity shows favorable associations in LUAD and UCS, but unfavorable associations in MESO, THCA, KIRC and UVM. In the MESO Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p = .003). MESO ranks highest by sampling consensus for Actin polymerization-dependent cell motility.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
MESOOSQuartileAll0.4090.685.00369view →
LUADDFSTertileAll0.7430.608.00258view →
THCADFSTertileII,III,IV0.5740.927.00241view →
KIRCDFSTertileIV0.3530.639.00230view →
UVMDFSMedianIII,IV0.3250.713.00323view →
UCSDFSMedianIV0.9090.416.00818view →
Pink = unfavorable, green = favorable. all 24 lineages →

Actin polymerization-dependent cell motility-MESO (OS)

Kaplan–Meier survival curve for Actin polymerization-dependent cell motility pathway activity in MESO: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Actin polymerization-dependent cell motility tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 11 cancer types, while mass-spec protein activity shows differences in 4. The strongest signals are in HNSC for RNA and HNSC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot11HNSC (6)view →
GO function (Protein (mass-spec))Box plot4HNSC (8)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across HNSC, CHOL and THCA and lower tumor activity in LUSC, COAD and LUAD. In the HNSC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.027, t-test p = .006).
LineageGenderStageFold-changepSampling consensus
HNSCAllII,III,IV+0.027.0066view →
CHOLAllAll+0.096<.0015view →
LUSCMaleII,III,IV−0.049<.0015view →
COADAllAll−0.035.0015view →
THCAFemaleAll+0.030.0044view →
LUADFemaleIII,IV−0.051.0013view →
Pink = higher activity in tumor. all 11 lineages →

Actin polymerization-dependent cell motility-HNSC

Tumor-vs-normal pathway-activity box plot for Actin polymerization-dependent cell motility in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with Actin polymerization-dependent cell motility pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in SOFT_TISSUE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA36,105STAD (23846)view →
Protein (mass-spec)15,508LSCC (4815)view →
Protein (mass-spec)
Protein (mass-spec)11,190GBM (3150)view →
RNA2,295LSCC (521)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,916SOFT_TISSUE (187)view →
RNA1,795SOFT_TISSUE (222)view →
RNA
RNA8,032CNS (1854)view →
CRISPR2,052OVARY (168)view →
Protein (mass-spec)
RNA3,079BLOOD_Leukemia (1193)view →
Protein (mass-spec)2,407LUNG_NSCLC_LUAD (633)view →
shRNA
RNA998LUNG_SCLC (309)view →
shRNA981LUNG_SCLC (215)view →