Regulation of phospholipid catabolic process

associated omics data
GO:0060696Ontology (GO BP)GO biological process · ~7 member genes

Q-omics provides the Regulation of phospholipid catabolic process (GO:0060696) pathway profile, scoring each patient from the combined activity of its roughly 7 member genes. Pathway activity is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in MESO. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 12, with the highest sampling consensus in KIRC. Additionally, pathway RNA activity shows 34,096 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight MESO, KIRC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Regulation of phospholipid catabolic process survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (25). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier25MESO (129)view →
GO function (Protein (mass-spec))Kaplan–Meier5HNSC (14)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Regulation of phospholipid catabolic process activity shows favorable associations in SCLC, but unfavorable associations in MESO, KIRC, HNSC, THCA and BLCA. In the MESO Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). MESO ranks highest by sampling consensus for Regulation of phospholipid catabolic process.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
MESOOSMedianAll0.2520.522<.001129view →
KIRCDFSTertileAll0.5610.695<.001117view →
HNSCDFSQuartileII,III,IV0.6260.751.00341view →
THCAOSMedianII,III,IV0.9551.000.00535view →
SCLCOSQuartileIII,IV0.6750.346.00632view →
BLCADFSTertileAll0.2980.442.01026view →
Pink = unfavorable, green = favorable. all 25 lineages →

Regulation of phospholipid catabolic process-MESO (OS)

Kaplan–Meier survival curve for Regulation of phospholipid catabolic process pathway activity in MESO: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Regulation of phospholipid catabolic process tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 12 cancer types, while mass-spec protein activity shows differences in 2. The strongest signals are in KIRC for RNA and LSCC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot12KIRC (12)view →
GO function (Protein (mass-spec))Box plot2LSCC (5)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KIRC, KICH, STAD, KIRP and COAD and lower tumor activity in BRCA. In the KIRC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.117, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCFemaleII,III,IV+0.117<.00112view →
KICHMaleAll+0.132<.0019view →
STADAllII,III,IV+0.117<.0019view →
KIRPMaleII,III,IV+0.104<.0019view →
COADAllII,III,IV+0.063<.0017view →
BRCAFemaleAll−0.072<.0016view →
Pink = higher activity in tumor. all 12 lineages →

Regulation of phospholipid catabolic process-KIRC

Tumor-vs-normal pathway-activity box plot for Regulation of phospholipid catabolic process in KIRC.

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Cross-omics associations

This table shows molecular features associated with Regulation of phospholipid catabolic process pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in URINARY_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA34,096STAD (13191)view →
Protein (mass-spec)9,979GBM (4120)view →
Protein (mass-spec)
Protein (mass-spec)20,309LSCC (6100)view →
RNA7,136LSCC (4224)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,436URINARY_TRACT (123)view →
shRNA1,191SKIN (176)view →
RNA
RNA6,426BLOOD_Leukemia (3488)view →
CRISPR2,147BLOOD_Leukemia (251)view →
shRNA
shRNA1,989KIDNEY (231)view →
RNA1,699UPPER_AERODIGESTIVE_TRACT (249)view →
Protein (mass-spec)
RNA1,626BLOOD_Leukemia (403)view →
CRISPR1,176STOMACH (161)view →