Positive regulation of alpha-beta T cell proliferation

associated omics data
GO:0046641Ontology (GO BP)GO biological process · ~25 member genes

Q-omics provides the Positive regulation of alpha-beta T cell proliferation (GO:0046641) pathway profile, scoring each patient from the combined activity of its roughly 25 member genes. Pathway activity is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in BLCA. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 7, with the highest sampling consensus in KIRC. Additionally, pathway RNA activity shows 35,440 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight BLCA, KIRC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Positive regulation of alpha-beta T cell proliferation survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier24BLCA (131)view →
GO function (Protein (mass-spec))Kaplan–Meier6PDAC (11)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Positive regulation of alpha-beta T cell proliferation activity shows favorable associations in BLCA, HNSC, SKCM and LUAD, but unfavorable associations in UVM and KIRC. In the BLCA Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). BLCA ranks highest by sampling consensus for Positive regulation of alpha-beta T cell proliferation.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BLCAOSTertileAll0.5140.328<.001131view →
HNSCDFSMedianAll0.7560.651<.001125view →
SKCMOSMedianAll0.4520.248<.001123view →
LUADOSQuartileII,III,IV0.8020.472.00146view →
UVMDFSQuartileII,III,IV0.3660.814.00236view →
KIRCOSMedianAll0.5380.712<.00132view →
Pink = unfavorable, green = favorable. all 24 lineages →

Positive regulation of alpha-beta T cell proliferation-BLCA (OS)

Kaplan–Meier survival curve for Positive regulation of alpha-beta T cell proliferation pathway activity in BLCA: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Positive regulation of alpha-beta T cell proliferation tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 7 cancer types, while mass-spec protein activity shows differences in 4. The strongest signals are in KIRC for RNA and CCRCC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot7KIRC (11)view →
GO function (Protein (mass-spec))Box plot4CCRCC (9)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KIRC, KIRP, HNSC, STAD and CHOL and lower tumor activity in LUSC. In the KIRC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.092, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleIV+0.092<.00111view →
KIRPAllAll+0.033.0026view →
LUSCAllAll−0.035.0015view →
HNSCMaleAll+0.024.0145view →
STADAllAll+0.063.0014view →
CHOLAllAll+0.066<.0012view →
Pink = higher activity in tumor. all 7 lineages →

Positive regulation of alpha-beta T cell proliferation-KIRC

Tumor-vs-normal pathway-activity box plot for Positive regulation of alpha-beta T cell proliferation in KIRC.

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Cross-omics associations

This table shows molecular features associated with Positive regulation of alpha-beta T cell proliferation pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in BLOOD_Myeloma.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA35,440STAD (17910)view →
Protein (mass-spec)22,975LSCC (11952)view →
Protein (mass-spec)
Protein (mass-spec)16,106LSCC (5256)view →
RNA8,856LSCC (4855)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR683BLOOD_Myeloma (92)view →
RNA517BLOOD_Myeloma (124)view →
RNA
RNA6,918BONE (1832)view →
CRISPR2,187BONE (272)view →
shRNA
RNA2,168LUNG_NSCLC_LUAD (421)view →
shRNA1,948BREAST (230)view →
Protein (mass-spec)
RNA2,118BREAST (974)view →
CRISPR1,325LUNG_SCLC (179)view →