Mitotic DNA integrity checkpoint signaling

associated omics data
GO:0044774Ontology (GO BP)GO biological process · ~87 member genes

Q-omics provides the Mitotic DNA integrity checkpoint signaling (GO:0044774) pathway profile, scoring each patient from the combined activity of its roughly 87 member genes. Pathway activity is associated with patient survival in 28 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 15, with the highest sampling consensus in BLCA. Additionally, pathway RNA activity shows 36,849 significant cross-omics associations, again with the highest sampling consensus in UCEC. Together, these results highlight KIRC, BLCA, and UCEC as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Mitotic DNA integrity checkpoint signaling survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (28). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier28KIRC (166)view →
GO function (Protein (mass-spec))Kaplan–Meier6PDAC (52)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Mitotic DNA integrity checkpoint signaling activity shows unfavorable associations in KIRC, MESO, ACC, UVM, LIHC and LGG. In the KIRC Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). KIRC ranks highest by sampling consensus for Mitotic DNA integrity checkpoint signaling.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSMedianAll0.5130.721<.001166view →
MESOOSMedianAll0.3860.638<.001144view →
ACCDFSMedianAll0.3510.707<.001118view →
UVMDFSQuartileAll0.2270.950<.00189view →
LIHCDFSMedianAll0.4540.610<.00179view →
LGGOSMedianAll0.6790.930<.00154view →
Pink = unfavorable, green = favorable. all 28 lineages →

Mitotic DNA integrity checkpoint signaling-KIRC (DFS)

Kaplan–Meier survival curve for Mitotic DNA integrity checkpoint signaling pathway activity in KIRC: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Mitotic DNA integrity checkpoint signaling tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 15 cancer types, while mass-spec protein activity shows differences in 5. The strongest signals are in HNSC for RNA and HNSC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot15HNSC (11)view →
GO function (Protein (mass-spec))Box plot5HNSC (12)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across BLCA, HNSC, COAD, LUAD and LUSC and lower tumor activity in THCA. In the BLCA box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.077, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAAllIII,IV+0.077<.00111view →
HNSCMaleIII,IV+0.059<.00111view →
COADMaleAll+0.049<.00111view →
LUADMaleAll+0.063<.0019view →
THCAFemaleII,III,IV−0.032<.0019view →
LUSCMaleII,III,IV+0.091<.0018view →
Pink = higher activity in tumor. all 15 lineages →

Mitotic DNA integrity checkpoint signaling-BLCA

Tumor-vs-normal pathway-activity box plot for Mitotic DNA integrity checkpoint signaling in BLCA.

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Cross-omics associations

This table shows molecular features associated with Mitotic DNA integrity checkpoint signaling pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in UCEC. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in BONE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA36,849UCEC (24230)view →
Protein (mass-spec)17,838LUAD (7231)view →
Protein (mass-spec)
Protein (mass-spec)15,701BRCA (5496)view →
RNA4,656BRCA (3389)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA2,799BONE (1013)view →
CRISPR2,758BONE (225)view →
RNA
RNA11,471BLOOD_Leukemia (4733)view →
CRISPR2,045BONE (173)view →
shRNA
shRNA2,097STOMACH (241)view →
CRISPR1,713CNS (180)view →
Protein (mass-spec)
CRISPR1,676UPPER_AERODIGESTIVE_TRACT (194)view →
RNA1,556BREAST (524)view →