WDR38

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WDR38 mutation is significantly associated with the RNA expression of many other genes, with 857 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible WDR38-associated genes across cancer lineages are RN7SL248P, RN7SL763P, and RN7SL478P. Each is linked with WDR38 in more than 1 cancer types. Because this analysis shows association rather than direction, both WDR38-to-partner and partner-to-WDR38 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL248P grouped by WDR38-low versus WDR38-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WDR38→partner) and Y-score (partner→WDR38) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRN7SL248P →+0.075+3.500<.001.00232
COADRN7SL763P →+0.408+6.392<.001.00132
COADRN7SL478P →+0.819+5.145<.001.00732
UCECRNU4-58P →+0.215+2.870<.001.00132
UCECIGLVI-38 →+0.116+2.298<.001.00632
UCECOSTF1P1 →+0.196+2.597.003<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 857 associations by consensus.

RN7SL248P by WDR38 expression — UCEC

Box plot of RN7SL248P in WDR38-low vs WDR38-high samples in UCEC.

Explore this box plot interactively →

Exploration