SLC1A4

Across TCGA patient cohorts, SLC1A4 protein abundance is significantly associated with the RNA expression of many other genes, with 14,143 significant associations in total. GBM shows the largest number of these associations.

The most reproducible SLC1A4-associated genes across cancer lineages are RNU6-548P, ABI3BP, and TGFBR2. Each is linked with SLC1A4 in more than 6 cancer types. Because this analysis shows association rather than direction, both SLC1A4-to-partner and partner-to-SLC1A4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SLC1A4 versus RNU6-548P in HNSC, with a Pearson correlation of 0.29.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SLC1A4→partner) and Y-score (partner→SLC1A4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	RNU6-548P →	+0.911	+0.544	.001	<.001	3	7
HNSC	ABI3BP →	-1.192	-0.496	<.001	.001	3	5
HNSC	TGFBR2 →	-0.779	-0.595	<.001	<.001	3	5
LUAD	ELFN2 →	-0.779	-0.318	.002	.002	3	5
BRCA	CAMK2N2 →	+0.913	+0.701	<.001	.003	3	4
OV	SREBF2 →	+0.877	+0.334	<.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,143 associations by consensus.

SLC1A4 vs RNU6-548P — HNSC

Explore this scatter interactively →