SCUBE1-AS2

Across TCGA patient cohorts, SCUBE1-AS2 RNA expression is significantly associated with the RNA expression of many other genes, with 8,780 significant associations in total. THYM shows the largest number of these associations.

The most reproducible SCUBE1-AS2-associated genes across cancer lineages are SCUBE1, TSNAXIP1, and LINC00893. Each is linked with SCUBE1-AS2 in more than 22 cancer types. Because this analysis shows association rather than direction, both SCUBE1-AS2-to-partner and partner-to-SCUBE1-AS2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, SCUBE1-AS2 versus SCUBE1 in PCPG, with a Pearson correlation of 0.63.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (SCUBE1-AS2→partner) and Y-score (partner→SCUBE1-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
PCPG	SCUBE1 →	+2.345	+0.186	<.001	<.001	3	23
UCEC	TSNAXIP1 →	+1.229	+0.519	<.001	<.001	3	15
LUAD	LINC00893 →	+0.635	+0.210	<.001	<.001	3	14
UCEC	CCDC17 →	+1.842	+0.546	<.001	<.001	3	14
LUAD	TTLL3 →	+0.680	+0.225	<.001	<.001	3	14
UCEC	SPAG8 →	+1.534	+0.550	<.001	<.001	3	14

Each partner links to its Q-omics profile. Showing the 6 strongest of 8,780 associations by consensus.

SCUBE1-AS2 vs SCUBE1 — PCPG

Explore this scatter interactively →