SCN10A

associated omics data
sodium voltage-gated channel alpha subunit 10Genealiases: FEPS2 · Nav1.8 · PN3 · SNS

Q-omics provides the consensus-scored SCN10A profile across patient tissues and cancer cell-line models. SCN10A expression is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, SCN10A is differentially expressed in 7, with the highest sampling consensus in KIRC. Additionally, SCN10A mutation status shows 7,187 significant gene co-expression associations, with the highest sampling consensus in UCEC. Together, these results highlight ACC, KIRC, and UCEC as cancer lineages where SCN10A shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes SCN10A survival associations across molecular data types. SCN10A RNA expression shows survival associations in the most cancer types (22), followed by mutation status (8) and mass-spec protein abundance (1). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
SCN10A data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier22ACC (54)view →
MutationKaplan–Meier8ESCA (18)view →
Protein (mass-spec)Kaplan–Meier1LSCC (10)view →
This table ranks reproducible SCN10A RNA expression–survival associations across cancer types. High SCN10A expression shows unfavorable associations in ACC and BRCA, but favorable associations in KIRP, KIRC, CESC and LUAD. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p = .005). Together, the overview and detailed table identify ACC as the clearest survival context for SCN10A RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCOSTertileII,III,IV0.6880.885.00554view →
KIRPDFSMedianAll0.9810.869.00153view →
KIRCDFSMedianAll0.9380.833<.00135view →
CESCOSTertileAll0.8880.756.00634view →
BRCADFSMedianII,III,IV0.8460.909.00632view →
LUADOSTertileAll0.8940.782.00132view →
Pink = unfavorable, green = favorable. all 22 lineages →

SCN10A-ACC (OS)

Kaplan–Meier survival curve for SCN10A RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes SCN10A tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 7, while mass-spec protein shows differences in 1. The strongest signals are observed in KIRC for RNA and HNSC for protein.
SCN10A data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot7KIRC (6)view →
Protein (mass-spec)Box plot1HNSC (11)view →
This table ranks reproducible tumor–normal expression differences for SCN10A. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. SCN10A shows lower tumor expression in LUSC and LUAD and higher tumor expression in KIRC, KIRP, PRAD and THCA. The KIRC box plot shows higher SCN10A RNA expression in tumor versus normal tissue (log2 FC = +0.033, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+0.033<.0016view →
KIRPAllAll+0.088.0022view →
PRADAllAll+0.011.0352view →
LUSCMaleII,III,IV−0.023.0441view →
LUADAllAll−0.012.0341view →
THCAFemaleAll+0.005.0461view →
Green = repressed in tumor. all 7 lineages →

SCN10A-KIRC

Tumor-vs-normal expression box plot for SCN10A in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with SCN10A in patient tissues and cancer cell lines. In patient samples, SCN10A shows the broadest associations at the RNA and protein expression levels, with UCEC recurring as the lineage with the largest associated feature set. In cancer cell lines, SCN10A RNA and mutation anchors are most strongly linked to RNA-expression features, especially in BREAST, while CRISPR and shRNA rows add functional-dependency signals in SKIN and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
Mutation
RNA7,187UCEC (3457)view →
Protein (RPPA)119UCEC (57)view →
RNA
Function (RNA)6,720STAD (6003)view →
RNA4,613KIRP (867)view →
Protein (mass-spec)
Protein (mass-spec)739HNSC (683)view →
Function (mass-spec)275HNSC (222)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,543BREAST (117)view →
RNA1,106SKIN (198)view →
Mutation
Mutation3,903LARGE_INTESTINE (3158)view →
RNA483LARGE_INTESTINE (263)view →
shRNA
RNA1,535SOFT_TISSUE (225)view →
shRNA1,296SKIN (136)view →
RNA
RNA1,021UPPER_AERODIGESTIVE_TRACT (437)view →
Mutation156LUNG_NSCLC_LUAD (100)view →