RARB

associated omics data
retinoic acid receptor betaGenealiases: HAP · MCOPS12 · NR1B2 · RARbeta · RARbeta1 · RRB2

Q-omics provides the consensus-scored RARB profile across patient tissues and cancer cell-line models. RARB expression is associated with patient survival in 29 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, RARB is differentially expressed in 10, with the highest sampling consensus in THCA. Additionally, RARB RNA expression shows 19,946 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight KIRC, THCA, and TGCT as cancer lineages where RARB shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RARB survival associations across molecular data types. RARB RNA expression shows survival associations in the most cancer types (29), followed by mutation status (6). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RARB data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier29KIRC (151)view →
MutationKaplan–Meier6UCEC (6)view →
This table ranks reproducible RARB RNA expression–survival associations across cancer types. High RARB expression shows unfavorable associations in LUAD and STAD, but favorable associations in KIRC, UVM, UCS and SKCM. The KIRC Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for RARB RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSMedianAll0.7270.542<.001151view →
UVMOSTertileAll0.9550.537.00159view →
LUADDFSMedianAll0.2590.443.00344view →
UCSOSQuartileII,III,IV0.8970.287.00332view →
SKCMDFSTertileAll0.2550.114<.00129view →
STADDFSMedianAll0.2680.455.00926view →
Pink = unfavorable, green = favorable. all 29 lineages →

RARB-KIRC (DFS)

Kaplan–Meier survival curve for RARB RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes RARB tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 10, while mass-spec protein shows differences in 1. The strongest signals are observed in THCA for RNA and CCRCC for protein.
RARB data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot10THCA (10)view →
Protein (mass-spec)Box plot1CCRCC (5)view →
This table ranks reproducible tumor–normal expression differences for RARB. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RARB shows lower tumor expression in THCA, KICH, KIRC, BRCA, BLCA and LUAD. The THCA box plot shows higher RARB RNA expression in normal versus tumor tissue (log2 FC = −2.162, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
THCAMaleIII,IV−2.162<.00110view →
KICHAllAll−1.289<.0019view →
KIRCMaleII,III,IV−0.839<.0019view →
BRCAFemaleAll−0.976<.0016view →
BLCAAllIV−1.261.0025view →
LUADFemaleIII,IV−0.815.0035view →
Green = repressed in tumor. all 10 lineages →

RARB-THCA

Tumor-vs-normal expression box plot for RARB in THCA.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with RARB in patient tissues and cancer cell lines. In patient samples, RARB shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set. In cancer cell lines, RARB RNA and mutation anchors are most strongly linked to RNA-expression features, especially in UPPER_AERODIGESTIVE_TRACT, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Lymphoma and BONE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA19,946TGCT (7722)view →
Protein (mass-spec)15,440CCRCC (5470)view →
Mutation
RNA4,156UCEC (3835)view →
Protein (RPPA)28UCEC (25)view →
Protein (mass-spec)
RNA117CCRCC (117)view →
Protein (mass-spec)112CCRCC (112)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,989UPPER_AERODIGESTIVE_TRACT (180)view →
RNA1,337BLOOD_Lymphoma (210)view →
RNA
RNA7,295BONE (2563)view →
Function (RNA)3,555BONE (1615)view →
Mutation
Mutation3,882LARGE_INTESTINE (3647)view →
RNA545LARGE_INTESTINE (521)view →
shRNA
RNA1,817BLOOD_Leukemia (376)view →
shRNA1,753BLOOD_Leukemia (215)view →