PMPCB

associated omics data
peptidase, mitochondrial processing subunit betaGenealiases: Beta-MPP · MAS1 · MPP11 · MPPB · MPPP52 · P-52

Q-omics provides the consensus-scored PMPCB profile across patient tissues and cancer cell-line models. PMPCB expression is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, PMPCB is differentially expressed in 12, with the highest sampling consensus in COAD. Additionally, PMPCB protein abundance shows 25,774 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight BRCA, COAD, and GBM as cancer lineages where PMPCB shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PMPCB survival associations across molecular data types. PMPCB RNA expression shows survival associations in the most cancer types (22), followed by mutation status (5) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PMPCB data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier22BRCA (88)view →
MutationKaplan–Meier5LIHC (15)view →
Protein (mass-spec)Kaplan–Meier5LUAD (27)view →
This table ranks reproducible PMPCB RNA expression–survival associations across cancer types. High PMPCB expression shows unfavorable associations in LGG, KICH, SCLC and UVM, but favorable associations in BRCA and KIRC. The BRCA Kaplan–Meier curve shows clear separation, with the low-expression group declining faster, consistent with the favorable association (log-rank p = .002). Together, the overview and detailed table identify BRCA as the clearest survival context for PMPCB RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCADFSQuartileIII,IV0.9060.724.00288view →
KIRCDFSMedianAll0.7270.536<.00169view →
LGGOSQuartileAll0.7090.897<.00133view →
KICHOSQuartileII,III,IV0.3820.928.00332view →
SCLCDFSTertileAll0.5140.780.00928view →
UVMDFSMedianIII,IV0.2080.740.00628view →
Pink = unfavorable, green = favorable. all 22 lineages →

PMPCB-BRCA (DFS)

Kaplan–Meier survival curve for PMPCB RNA expression in BRCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PMPCB tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 12, while mass-spec protein shows differences in 5. The strongest signals are observed in LIHC for RNA and CCRCC for protein.
PMPCB data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot12LIHC (8)view →
Protein (mass-spec)Box plot5CCRCC (12)view →
This table ranks reproducible tumor–normal expression differences for PMPCB. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PMPCB shows higher tumor expression in COAD, LUAD, LIHC, KICH, CHOL and ESCA. The COAD box plot shows higher PMPCB RNA expression in tumor versus normal tissue (log2 FC = +0.518, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADAllII,III,IV+0.518<.0018view →
LUADMaleAll+0.512<.0018view →
LIHCMaleAll+0.490<.0018view →
KICHMaleII,III,IV+0.711<.0015view →
CHOLAllAll+0.655<.0015view →
ESCAAllAll+0.671<.0014view →
Green = repressed in tumor. all 12 lineages →

PMPCB-COAD

Tumor-vs-normal expression box plot for PMPCB in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with PMPCB in patient tissues and cancer cell lines. In patient samples, PMPCB shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set. In cancer cell lines, PMPCB RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in URINARY_TRACT and UPPER_AERODIGESTIVE_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
Protein (mass-spec)
Protein (mass-spec)25,774GBM (8118)view →
RNA16,353LSCC (5843)view →
RNA
RNA18,948ACC (10087)view →
Protein (mass-spec)14,865LSCC (7190)view →
Mutation
RNA2,102UCEC (1994)view →
Protein (RPPA)22UCEC (22)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,818LUNG_NSCLC_LUAD (154)view →
RNA1,570URINARY_TRACT (262)view →
RNA
RNA8,393UPPER_AERODIGESTIVE_TRACT (3240)view →
Function (RNA)3,418BLOOD_Lymphoma (1130)view →
Protein (mass-spec)
RNA2,145BLOOD_Leukemia (441)view →
Protein (mass-spec)2,023SKIN (703)view →
shRNA
shRNA2,066UPPER_AERODIGESTIVE_TRACT (388)view →
CRISPR1,448BLOOD_Leukemia (161)view →