PCDHGB1

associated omics data
Gene

Q-omics provides the consensus-scored PCDHGB1 profile across patient tissues and cancer cell-line models. PCDHGB1 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in BLCA. Among the 18 cancer types available for tumor–normal comparison, PCDHGB1 is differentially expressed in 14, with the highest sampling consensus in HNSC. Additionally, PCDHGB1 RNA expression shows 15,737 significant gene co-expression associations, with the highest sampling consensus in THYM. Together, these results highlight BLCA, HNSC, and THYM as cancer lineages where PCDHGB1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes PCDHGB1 survival associations across molecular data types. PCDHGB1 RNA expression shows survival associations in the most cancer types (23), followed by mutation status (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
PCDHGB1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23BLCA (55)view →
MutationKaplan–Meier5UCEC (32)view →
This table ranks reproducible PCDHGB1 RNA expression–survival associations across cancer types. High PCDHGB1 expression shows unfavorable associations in BLCA, CESC, BRCA, UVM, LUAD and LUSC. The BLCA Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify BLCA as the clearest survival context for PCDHGB1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BLCADFSTertileAll0.2390.429<.00155view →
CESCDFSMedianAll0.7670.872.00250view →
BRCADFSTertileII,III,IV0.3460.582.00134view →
UVMDFSQuartileAll0.5361.000.00524view →
LUADOSTertileAll0.7430.856<.00124view →
LUSCDFSQuartileIII,IV0.1820.460.00422view →
Pink = unfavorable, green = favorable. all 23 lineages →

PCDHGB1-BLCA (DFS)

Kaplan–Meier survival curve for PCDHGB1 RNA expression in BLCA: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes PCDHGB1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 14. The strongest signals are observed in HNSC for RNA.
PCDHGB1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot14HNSC (9)view →
This table ranks reproducible tumor–normal expression differences for PCDHGB1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. PCDHGB1 shows lower tumor expression in KICH and THCA and higher tumor expression in HNSC, BLCA, LUAD and LIHC. The HNSC box plot shows higher PCDHGB1 RNA expression in tumor versus normal tissue (log2 FC = +0.564, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCAllAll+0.564<.0019view →
KICHFemaleAll−0.745<.0018view →
THCAMaleII,III,IV−0.929<.0017view →
BLCAMaleAll+0.640.0056view →
LUADAllAll+0.395.0016view →
LIHCAllAll+0.311<.0015view →
Green = repressed in tumor. all 14 lineages →

PCDHGB1-HNSC

Tumor-vs-normal expression box plot for PCDHGB1 in HNSC.

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Cross-omics associations

This table shows molecular features associated with PCDHGB1 in patient tissues and cancer cell lines. In patient samples, PCDHGB1 shows the broadest associations at the RNA and protein expression levels, with THYM recurring as the lineage with the largest associated feature set. In cancer cell lines, PCDHGB1 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in SKIN, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Leukemia and LARGE_INTESTINE.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA15,737THYM (6792)view →
Function (RNA)7,021THYM (3726)view →
Mutation
RNA4,015UCEC (2754)view →
Protein (RPPA)69UCEC (60)view →
Protein (mass-spec)
Protein (mass-spec)276GBM (276)view →
RNA170GBM (170)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,886SKIN (170)view →
RNA1,650BLOOD_Leukemia (271)view →
Mutation
Mutation5,587LARGE_INTESTINE (4232)view →
RNA221LARGE_INTESTINE (121)view →
shRNA
shRNA1,634KIDNEY (186)view →
CRISPR1,617UPPER_AERODIGESTIVE_TRACT (195)view →