NPPA-AS1

Across TCGA patient cohorts, NPPA-AS1 RNA expression is significantly associated with the RNA expression of many other genes, with 14,781 significant associations in total. UVM shows the largest number of these associations.

The most reproducible NPPA-AS1-associated genes across cancer lineages are NPPA, BRICD5, and SNORD99. Each is linked with NPPA-AS1 in more than 29 cancer types. Because this analysis shows association rather than direction, both NPPA-AS1-to-partner and partner-to-NPPA-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, NPPA-AS1 versus NPPA in LGG, with a Pearson correlation of 0.53.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (NPPA-AS1→partner) and Y-score (partner→NPPA-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LGG	NPPA →	+1.334	+0.524	<.001	<.001	3	30
KIRC	BRICD5 →	+1.251	+0.867	<.001	<.001	3	30
KIRC	SNORD99 →	+1.721	+0.725	<.001	<.001	3	29
ACC	MHENCR →	+1.259	+0.893	<.001	<.001	3	29
KIRP	CDK5RAP3 →	+1.018	+0.640	<.001	<.001	3	29
KIRC	ATAD3B →	+1.115	+0.870	<.001	<.001	3	29

Each partner links to its Q-omics profile. Showing the 6 strongest of 14,781 associations by consensus.

NPPA-AS1 vs NPPA — LGG

Explore this scatter interactively →