MIRLET7C

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, MIRLET7C mutation is significantly associated with the RNA expression of many other genes, with 6 significant associations in total. SKCM shows the largest number of these associations.

The most reproducible MIRLET7C-associated genes across cancer lineages are IL9, MIR5692C1, and SFXN4P1. Each is linked with MIRLET7C in more than 1 cancer types. Because this analysis shows association rather than direction, both MIRLET7C-to-partner and partner-to-MIRLET7C results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (MIRLET7C→partner) and Y-score (partner→MIRLET7C) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SKCMIL9 →+0.468+5.037<.001.00931
SKCMMIR5692C1 →+0.767+6.328<.001.00131
SKCMSFXN4P1 →+0.099+5.159<.001.00731
SKCMRNU6-490P →+0.383+5.037<.001.00931
SKCMRNU2-36P →+0.239+5.362<.001.00531
SKCMSTSP1 →+0.043+5.680<.001.00331
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

Exploration