RNU6-490P

associated omics data
RNA, U6 small nuclear 490, pseudogeneGenealiases: []

Q-omics provides the consensus-scored RNU6-490P profile across patient tissues and cancer cell-line models. RNU6-490P expression is associated with patient survival in 14 of 34 cancer types, with the highest sampling consensus in MESO. Among the 18 cancer types available for tumor–normal comparison, RNU6-490P is differentially expressed in 2, with the highest sampling consensus in LUSC. Additionally, RNU6-490P RNA expression shows 6,131 significant pathway-activity associations, with the highest sampling consensus in STAD. Together, these results highlight MESO, LUSC, and STAD as cancer lineages where RNU6-490P shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes RNU6-490P survival associations across molecular data types. RNU6-490P RNA expression shows survival associations in the most cancer types (14). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
RNU6-490P data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier14MESO (117)view →
This table ranks reproducible RNU6-490P RNA expression–survival associations across cancer types. High RNU6-490P expression shows unfavorable associations in MESO, ACC, LUSC, LIHC, GBM and STAD. The MESO Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify MESO as the clearest survival context for RNU6-490P RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
MESOOSTertileIII,IV0.2280.591<.001117view →
ACCDFSTertileAll0.0460.753<.001108view →
LUSCOSTertileIV0.0010.673.01436view →
LIHCDFSTertileII,III,IV0.0770.417.00836view →
GBMOSTertileAll0.0790.415.00318view →
STADOSQuartileIV0.1160.524.00318view →
Pink = unfavorable, green = favorable. all 14 lineages →

RNU6-490P-MESO (OS)

Kaplan–Meier survival curve for RNU6-490P RNA expression in MESO: high vs low expression groups.

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Tumor vs Normal expression

This table summarizes RNU6-490P tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 2. The strongest signals are observed in LUSC for RNA.
RNU6-490P data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot2LUSC (4)view →
This table ranks reproducible tumor–normal expression differences for RNU6-490P. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. RNU6-490P shows higher tumor expression in LUSC and STAD. The LUSC box plot shows higher RNU6-490P RNA expression in tumor versus normal tissue (log2 FC = +0.112, t-test p = .005).
LineageGenderStageFold-changepSampling consensus
LUSCAllAll+0.112.0054view →
STADMaleII,III,IV+0.295.0062view →
Green = repressed in tumor. all 2 lineages →

RNU6-490P-LUSC

Tumor-vs-normal expression box plot for RNU6-490P in LUSC.

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Cross-omics associations

This table shows molecular features associated with RNU6-490P in patient tissues and cancer cell lines. In patient samples, RNU6-490P shows the broadest associations at the RNA and protein expression levels, with STAD recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Function (RNA)6,131STAD (5081)view →
RNA5,993COAD (1917)view →