LINC00303

Across TCGA patient cohorts, LINC00303 mutation is significantly associated with the RNA expression of many other genes, with 1,428 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible LINC00303-associated genes across cancer lineages are RPL21P88, MIR4435-1, and YPEL5P3. Each is linked with LINC00303 in more than 1 cancer types. Because this analysis shows association rather than direction, both LINC00303-to-partner and partner-to-LINC00303 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RPL21P88 grouped by LINC00303-low versus LINC00303-high in LUAD.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (LINC00303→partner) and Y-score (partner→LINC00303) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	RPL21P88 →	+0.147	+5.030	<.001	<.001	3	2
LUAD	MIR4435-1 →	+0.419	+3.656	<.001	.006	3	2
UCEC	YPEL5P3 →	+0.137	+3.250	<.001	.001	3	2
BRCA	MIR6888 →	+0.530	+5.841	<.001	.003	3	1
SKCM	MIR7155 →	+0.547	+5.199	<.001	.003	3	1
UCEC	IGHV3OR16-13 →	+0.593	+2.896	.006	.001	3	1

Each partner links to its Q-omics profile. Showing the 6 strongest of 1,428 associations by consensus.

RPL21P88 by LINC00303 expression — LUAD

Explore this box plot interactively →