HLA-DQB2

RNA expression — cross-omics
Cross-omicsRNA → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, HLA-DQB2 RNA expression is significantly associated with the RNA expression of many other genes, with 1,687 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible HLA-DQB2-associated genes across cancer lineages are HLA-DQA2, HLA-DQB1, and HLA-DRB1. Each is linked with HLA-DQB2 in more than 7 cancer types. Because this analysis shows association rather than direction, both HLA-DQB2-to-partner and partner-to-HLA-DQB2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, HLA-DQB2 versus HLA-DQA2 in BLOOD_Lymphoma, with a Pearson correlation of 0.79.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (HLA-DQB2→partner) and Y-score (partner→HLA-DQB2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaHLA-DQA2 →+3.364+2.244<.001<.00138
BLOOD_MyelomaHLA-DQB1 →+3.698+2.247<.001<.00138
BLOOD_MyelomaHLA-DRB1 →+7.226+2.901<.001<.00136
BLOOD_MyelomaHLA-DQA1 →+6.413+3.085<.001<.00136
BLOOD_MyelomaHLA-DRB5 →+4.625+2.572<.001<.00136
BLOOD_LeukemiaHLA-DOA →+2.520+1.174<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest of 1,687 associations by consensus.

HLA-DQB2 vs HLA-DQA2 — BLOOD_Lymphoma

Per-sample scatter of HLA-DQB2 vs HLA-DQA2 in BLOOD_Lymphoma (Pearson r = 0.79).

Explore this scatter interactively →

Exploration