GK-IT1

associated omics data
GK intronic transcript 1Genealiases: []

Q-omics provides the consensus-scored GK-IT1 profile across patient tissues and cancer cell-line models. GK-IT1 expression is associated with patient survival in 15 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, GK-IT1 is differentially expressed in 7, with the highest sampling consensus in COAD. Additionally, GK-IT1 RNA expression shows 15,117 significant protein co-abundance associations, with the highest sampling consensus in GBM. Together, these results highlight KIRC, COAD, and GBM as cancer lineages where GK-IT1 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes GK-IT1 survival associations across molecular data types. GK-IT1 RNA expression shows survival associations in the most cancer types (15). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
GK-IT1 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier15KIRC (136)view →
This table ranks reproducible GK-IT1 RNA expression–survival associations across cancer types. High GK-IT1 expression shows unfavorable associations in KIRC, COAD, ACC, LGG, ESCA and BRCA. The KIRC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify KIRC as the clearest survival context for GK-IT1 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCDFSMedianAll0.5160.716<.001136view →
COADDFSMedianIII,IV0.5790.745.00238view →
ACCDFSQuartileAll0.2290.677<.00131view →
LGGOSTertileAll0.8110.921<.00131view →
ESCAOSMedianAll0.3910.612<.00125view →
BRCAOSQuartileIV0.2280.758.01721view →
Pink = unfavorable, green = favorable. all 15 lineages →

GK-IT1-KIRC (DFS)

Kaplan–Meier survival curve for GK-IT1 RNA expression in KIRC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes GK-IT1 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 7. The strongest signals are observed in COAD for RNA.
GK-IT1 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot7COAD (5)view →
This table ranks reproducible tumor–normal expression differences for GK-IT1. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. GK-IT1 shows lower tumor expression in LUSC and higher tumor expression in COAD, ESCA, STAD, BRCA and LUAD. The COAD box plot shows higher GK-IT1 RNA expression in tumor versus normal tissue (log2 FC = +0.269, t-test p = .004).
LineageGenderStageFold-changepSampling consensus
COADAllAll+0.269.0045view →
ESCAAllII,III,IV+1.740.0044view →
STADAllAll+0.579.0024view →
BRCAFemaleAll+0.130.0164view →
LUADAllII,III,IV+0.377.0311view →
LUSCAllAll−0.243.0291view →
Green = repressed in tumor. all 7 lineages →

GK-IT1-COAD

Tumor-vs-normal expression box plot for GK-IT1 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with GK-IT1 in patient tissues and cancer cell lines. In patient samples, GK-IT1 shows the broadest associations at the RNA and protein expression levels, with GBM recurring as the lineage with the largest associated feature set.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
Protein (mass-spec)15,117GBM (5636)view →
Function (RNA)6,804KIRC (4624)view →