FAM170B-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, FAM170B-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,412 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible FAM170B-AS1-associated proteins across cancer lineages are TRAF3IP3, HAAO, and IL16. Each is linked with FAM170B-AS1 in more than 3 cancer types. Because this analysis shows association rather than direction, both FAM170B-AS1-to-partner and partner-to-FAM170B-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, FAM170B-AS1 versus TRAF3IP3 in GBM, with a Pearson correlation of 0.40.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (FAM170B-AS1→partner) and Y-score (partner→FAM170B-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMTRAF3IP3 →+0.610+0.127<.001<.00134
HNSCHAAO →+0.388+0.189<.001.00634
LSCCIL16 →+0.595+0.121<.001<.00134
HNSCPRKCH →+0.496+0.164<.001.00334
GBMPIP4K2A →+0.661+0.115<.001.00534
LSCCWDR12 →-0.428-0.090<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,412 associations by consensus.

FAM170B-AS1 vs TRAF3IP3 — GBM

Per-sample scatter of FAM170B-AS1 vs TRAF3IP3 in GBM (Pearson r = 0.40).

Explore this scatter interactively →

Exploration