CNIH4

associated omics data
cornichon family member 4Genealiases: CNIH-4 · HSPC163

Q-omics provides the consensus-scored CNIH4 profile across patient tissues and cancer cell-line models. CNIH4 expression is associated with patient survival in 23 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, CNIH4 is differentially expressed in 15, with the highest sampling consensus in HNSC. Additionally, CNIH4 RNA expression shows 19,480 significant gene co-expression associations, with the highest sampling consensus in ACC. Together, these results highlight UVM, HNSC, and ACC as cancer lineages where CNIH4 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes CNIH4 survival associations across molecular data types. CNIH4 RNA expression shows survival associations in the most cancer types (23), followed by mutation status (5) and mass-spec protein abundance (5). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
CNIH4 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier23UVM (147)view →
MutationKaplan–Meier5SKCM (30)view →
Protein (mass-spec)Kaplan–Meier5GBM (26)view →
This table ranks reproducible CNIH4 RNA expression–survival associations across cancer types. High CNIH4 expression shows unfavorable associations in UVM, HNSC, ACC, KIRP, LIHC and LGG. The UVM Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify UVM as the clearest survival context for CNIH4 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMDFSMedianAll0.3830.840<.001147view →
HNSCDFSMedianAll0.2550.403<.001124view →
ACCDFSMedianAll0.2170.666<.001109view →
KIRPOSQuartileII,III,IV0.3990.806<.001108view →
LIHCOSTertileAll0.6920.843<.00167view →
LGGOSMedianAll0.7280.899<.00154view →
Pink = unfavorable, green = favorable. all 23 lineages →

CNIH4-UVM (DFS)

Kaplan–Meier survival curve for CNIH4 RNA expression in UVM: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes CNIH4 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 15, while mass-spec protein shows differences in 5. The strongest signals are observed in KIRC for RNA and COAD for protein.
CNIH4 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot15KIRC (12)view →
Protein (mass-spec)Box plot5COAD (11)view →
This table ranks reproducible tumor–normal expression differences for CNIH4. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. CNIH4 shows higher tumor expression in HNSC, KIRC, KIRP, LIHC, BLCA and COAD. The HNSC box plot shows higher CNIH4 RNA expression in tumor versus normal tissue (log2 FC = +1.148, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCMaleIV+1.148<.00112view →
KIRCFemaleIII,IV+0.684<.00112view →
KIRPAllIII,IV+1.040<.00111view →
LIHCMaleII,III,IV+1.673<.0019view →
BLCAFemaleAll+0.698<.0019view →
COADFemaleII,III,IV+0.618<.0019view →
Green = repressed in tumor. all 15 lineages →

CNIH4-HNSC

Tumor-vs-normal expression box plot for CNIH4 in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with CNIH4 in patient tissues and cancer cell lines. In patient samples, CNIH4 shows the broadest associations at the RNA and protein expression levels, with ACC recurring as the lineage with the largest associated feature set. In cancer cell lines, CNIH4 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in UPPER_AERODIGESTIVE_TRACT, while CRISPR and shRNA rows add functional-dependency signals in BLOOD_Leukemia and BLOOD_Lymphoma.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA19,480ACC (10045)view →
Protein (mass-spec)13,510LSCC (5566)view →
Protein (mass-spec)
Protein (mass-spec)13,826CCRCC (4923)view →
RNA4,148COAD (991)view →
Mutation
RNA432UCEC (431)view →
Infiltrating cells1UCEC (1)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,545UPPER_AERODIGESTIVE_TRACT (278)view →
RNA1,741BLOOD_Leukemia (240)view →
RNA
RNA7,323BLOOD_Lymphoma (2652)view →
Function (RNA)3,000BLOOD_Lymphoma (884)view →
shRNA
RNA1,611CNS (495)view →
shRNA1,421UPPER_AERODIGESTIVE_TRACT (400)view →