CCDC85B

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, CCDC85B protein abundance is significantly associated with the RNA expression of many other genes, with 6,235 significant associations in total. GBM shows the largest number of these associations.

The most reproducible CCDC85B-associated genes across cancer lineages are ATG14, ACTR10, and KLHL28. Each is linked with CCDC85B in more than 2 cancer types. Because this analysis shows association rather than direction, both CCDC85B-to-partner and partner-to-CCDC85B results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, CCDC85B versus ATG14 in GBM, with a Pearson correlation of 0.47.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (CCDC85B→partner) and Y-score (partner→CCDC85B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMATG14 →+0.493+0.440.001<.00133
CCRCCACTR10 →+0.508+0.517<.001<.00133
GBMKLHL28 →+0.517+0.511.004<.00133
CCRCCC1orf147 →-0.680-0.414<.001<.00133
LUADCGRRF1 →+0.338+0.323.001<.00123
CCRCCSAV1 →+0.379+0.378.005<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,235 associations by consensus.

CCDC85B vs ATG14 — GBM

Per-sample scatter of CCDC85B vs ATG14 in GBM (Pearson r = 0.47).

Explore this scatter interactively →

Exploration