Regulation of mitochondrial ATP synthesis coupled electron transport

associated omics data
GO:1905446Ontology (GO BP)GO biological process · ~7 member genes

Q-omics provides the Regulation of mitochondrial ATP synthesis coupled electron transport (GO:1905446) pathway profile, scoring each patient from the combined activity of its roughly 7 member genes. Pathway activity is associated with patient survival in 26 of 34 cancer types, with the highest sampling consensus in KIRC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 13, with the highest sampling consensus in BLCA. Additionally, pathway RNA activity shows 34,200 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight KIRC, BLCA, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Regulation of mitochondrial ATP synthesis coupled electron transport survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (26). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier26KIRC (158)view →
GO function (Protein (mass-spec))Kaplan–Meier4LUAD (26)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Regulation of mitochondrial ATP synthesis coupled electron transport activity shows unfavorable associations in KIRC, KIRP, LUAD, MESO, ACC and KICH. In the KIRC Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). KIRC ranks highest by sampling consensus for Regulation of mitochondrial ATP synthesis coupled electron transport.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
KIRCOSMedianAll0.5380.715<.001158view →
KIRPDFSMedianAll0.7590.926<.001154view →
LUADOSMedianAll0.2610.471<.001117view →
MESOOSTertileAll0.2510.471.00175view →
ACCOSTertileII,III,IV0.5410.848.00166view →
KICHDFSMedianAll0.6731.000<.00145view →
Pink = unfavorable, green = favorable. all 26 lineages →

Regulation of mitochondrial ATP synthesis coupled electron transport-KIRC (OS)

Kaplan–Meier survival curve for Regulation of mitochondrial ATP synthesis coupled electron transport pathway activity in KIRC: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Regulation of mitochondrial ATP synthesis coupled electron transport tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 13 cancer types, while mass-spec protein activity shows differences in 6. The strongest signals are in BLCA for RNA and LUAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot13BLCA (10)view →
GO function (Protein (mass-spec))Box plot6LUAD (9)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows consistently higher tumor activity across BLCA, COAD, KIRP, LUAD, HNSC and KIRC. In the BLCA box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.178, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BLCAMaleIII,IV+0.178<.00110view →
COADFemaleII,III,IV+0.124<.0019view →
KIRPMaleIII,IV+0.113<.0019view →
LUADMaleIII,IV+0.158<.0018view →
HNSCMaleAll+0.059<.0018view →
KIRCMaleAll+0.032<.0018view →
Pink = higher activity in tumor. all 13 lineages →

Regulation of mitochondrial ATP synthesis coupled electron transport-BLCA

Tumor-vs-normal pathway-activity box plot for Regulation of mitochondrial ATP synthesis coupled electron transport in BLCA.

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Cross-omics associations

This table shows molecular features associated with Regulation of mitochondrial ATP synthesis coupled electron transport pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA34,200STAD (15462)view →
Protein (mass-spec)15,270LUAD (6393)view →
Protein (mass-spec)
Protein (mass-spec)24,217LUAD (10261)view →
RNA11,595BRCA (5602)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,939BLOOD_Leukemia (151)view →
RNA1,639UPPER_AERODIGESTIVE_TRACT (214)view →
RNA
RNA5,676BLOOD_Leukemia (1643)view →
CRISPR1,875SOFT_TISSUE (132)view →
Protein (mass-spec)
RNA2,427UPPER_AERODIGESTIVE_TRACT (773)view →
Protein (mass-spec)1,792SKIN (581)view →
shRNA
shRNA1,320SOFT_TISSUE (179)view →
RNA1,282SOFT_TISSUE (404)view →