Negative regulation of response to oxidative stress

associated omics data
GO:1902883Ontology (GO BP)GO biological process · ~10 member genes

Q-omics provides the Negative regulation of response to oxidative stress (GO:1902883) pathway profile, scoring each patient from the combined activity of its roughly 10 member genes. Pathway activity is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 11, with the highest sampling consensus in KIRC. Additionally, pathway RNA activity shows 35,153 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight ACC, KIRC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Negative regulation of response to oxidative stress survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (25). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier25ACC (50)view →
GO function (Protein (mass-spec))Kaplan–Meier5LUAD (26)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Negative regulation of response to oxidative stress activity shows favorable associations in UVM and UCS, but unfavorable associations in ACC, MESO, LUAD and STAD. In the ACC Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). ACC ranks highest by sampling consensus for Negative regulation of response to oxidative stress.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCOSMedianIV0.4030.917<.00150view →
UVMOSMedianAll0.8050.475.00347view →
MESOOSQuartileAll0.2590.535.00147view →
LUADOSTertileAll0.2340.496.00335view →
UCSDFSQuartileII,III,IV0.7460.227.00224view →
STADOSQuartileIV0.1740.506.01724view →
Pink = unfavorable, green = favorable. all 25 lineages →

Negative regulation of response to oxidative stress-ACC (OS)

Kaplan–Meier survival curve for Negative regulation of response to oxidative stress pathway activity in ACC: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Negative regulation of response to oxidative stress tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 11 cancer types, while mass-spec protein activity shows differences in 3. The strongest signals are in KIRC for RNA and HNSC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot11KIRC (11)view →
GO function (Protein (mass-spec))Box plot3HNSC (9)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across COAD and STAD and lower tumor activity in KIRC, LIHC, BRCA and KIRP. In the KIRC box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.047, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleII,III,IV−0.047<.00111view →
COADFemaleIII,IV+0.132<.00110view →
LIHCAllII,III,IV−0.069<.0018view →
BRCAAllAll−0.064<.0016view →
STADMaleAll+0.058<.0015view →
KIRPFemaleII,III,IV−0.042.0343view →
Pink = higher activity in tumor. all 11 lineages →

Negative regulation of response to oxidative stress-KIRC

Tumor-vs-normal pathway-activity box plot for Negative regulation of response to oxidative stress in KIRC.

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Cross-omics associations

This table shows molecular features associated with Negative regulation of response to oxidative stress pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in CNS.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA35,153STAD (15552)view →
Protein (mass-spec)5,186LSCC (1038)view →
Protein (mass-spec)
Protein (mass-spec)22,817GBM (8411)view →
RNA7,728LSCC (4951)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
RNA1,065CNS (397)view →
CRISPR1,042CNS (193)view →
RNA
RNA2,667BLOOD_Leukemia (422)view →
CRISPR1,770OESOPHAGUS (143)view →
shRNA
RNA2,501BLOOD_Leukemia (478)view →
shRNA2,220BREAST (234)view →
Protein (mass-spec)
RNA2,435BREAST (666)view →
Protein (mass-spec)1,993OVARY (884)view →