Regulation of monocyte chemotaxis

associated omics data
GO:0090025Ontology (GO BP)GO biological process · ~29 member genes

Q-omics provides the Regulation of monocyte chemotaxis (GO:0090025) pathway profile, scoring each patient from the combined activity of its roughly 29 member genes. Pathway activity is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in UVM. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 13, with the highest sampling consensus in KIRC. Additionally, pathway RNA activity shows 34,447 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight UVM, KIRC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Regulation of monocyte chemotaxis survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (22). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier22UVM (101)view →
GO function (Protein (mass-spec))Kaplan–Meier4LSCC (31)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Regulation of monocyte chemotaxis activity shows favorable associations in SKCM and LUAD, but unfavorable associations in UVM, LGG, LUSC and THYM. In the UVM Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). UVM ranks highest by sampling consensus for Regulation of monocyte chemotaxis.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
UVMOSMedianAll0.3900.783<.001101view →
SKCMOSMedianAll0.4420.259<.00184view →
LGGOSTertileAll0.7340.867<.00140view →
LUSCDFSMedianAll0.2850.452.00431view →
THYMOSMedianAll0.9071.000.00326view →
LUADDFSMedianAll0.7620.610.00125view →
Pink = unfavorable, green = favorable. all 22 lineages →

Regulation of monocyte chemotaxis-UVM (OS)

Kaplan–Meier survival curve for Regulation of monocyte chemotaxis pathway activity in UVM: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Regulation of monocyte chemotaxis tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 13 cancer types, while mass-spec protein activity shows differences in 5. The strongest signals are in KIRC for RNA and LSCC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot13KIRC (10)view →
GO function (Protein (mass-spec))Box plot5LSCC (7)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KIRC, HNSC and STAD and lower tumor activity in LUSC, LUAD and KICH. In the KIRC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.063, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+0.063<.00110view →
LUSCFemaleII,III,IV−0.131<.0018view →
LUADAllAll−0.047<.0018view →
HNSCAllAll+0.031.0028view →
STADFemaleAll+0.147<.0015view →
KICHAllII,III,IV−0.058<.0015view →
Pink = higher activity in tumor. all 13 lineages →

Regulation of monocyte chemotaxis-KIRC

Tumor-vs-normal pathway-activity box plot for Regulation of monocyte chemotaxis in KIRC.

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Cross-omics associations

This table shows molecular features associated with Regulation of monocyte chemotaxis pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in BLOOD_Leukemia.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA34,447STAD (16955)view →
Protein (mass-spec)22,039LSCC (11837)view →
Protein (mass-spec)
Protein (mass-spec)23,105GBM (8473)view →
RNA12,002GBM (7346)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,773BLOOD_Leukemia (186)view →
shRNA1,340BONE (169)view →
RNA
RNA9,784BONE (4353)view →
CRISPR2,240BONE (307)view →
Protein (mass-spec)
RNA4,230BREAST (1644)view →
Protein (mass-spec)1,725LARGE_INTESTINE (397)view →
shRNA
shRNA1,724SKIN (188)view →
CRISPR1,156URINARY_TRACT (135)view →