Vocalization behavior

associated omics data
GO:0071625Ontology (GO BP)GO biological process · ~19 member genes

Q-omics provides the Vocalization behavior (GO:0071625) pathway profile, scoring each patient from the combined activity of its roughly 19 member genes. Pathway activity is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in CHOL. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 14, with the highest sampling consensus in LIHC. Additionally, pathway RNA activity shows 30,415 significant cross-omics associations, again with the highest sampling consensus in OV. Together, these results highlight CHOL, LIHC, and OV as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Vocalization behavior survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier20CHOL (47)view →
GO function (Protein (mass-spec))Kaplan–Meier7COAD (48)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Vocalization behavior activity shows favorable associations in LGG and ESCA, but unfavorable associations in CHOL, CESC, READ and THYM. In the CHOL Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p = .006). CHOL ranks highest by sampling consensus for Vocalization behavior.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
CHOLOSMedianII,III,IV0.2860.748.00647view →
LGGDFSMedianAll0.5070.296<.00140view →
CESCDFSQuartileAll0.6990.886.00138view →
ESCAOSMedianIII,IV0.6910.419.00524view →
READOSTertileII,III,IV0.4570.869.01618view →
THYMDFSTertileAll0.5100.902.00716view →
Pink = unfavorable, green = favorable. all 20 lineages →

Vocalization behavior-CHOL (OS)

Kaplan–Meier survival curve for Vocalization behavior pathway activity in CHOL: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Vocalization behavior tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 14 cancer types, while mass-spec protein activity shows differences in 3. The strongest signals are in LIHC for RNA and LUAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot14LIHC (8)view →
GO function (Protein (mass-spec))Box plot3LUAD (9)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across LIHC, HNSC and THCA and lower tumor activity in COAD, BRCA and UCEC. In the LIHC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.059, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LIHCFemaleII,III,IV+0.059<.0018view →
COADMaleAll−0.060<.0017view →
HNSCAllAll+0.029<.0017view →
THCAFemaleAll+0.030<.0016view →
BRCAFemaleAll−0.023<.0016view →
UCECAllAll−0.060<.0014view →
Pink = higher activity in tumor. all 14 lineages →

Vocalization behavior-LIHC

Tumor-vs-normal pathway-activity box plot for Vocalization behavior in LIHC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with Vocalization behavior pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in OV. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in LIVER.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA30,415OV (14476)view →
Protein (mass-spec)12,973GBM (5579)view →
Protein (mass-spec)
Protein (mass-spec)22,076GBM (7216)view →
RNA7,766CCRCC (3018)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,784LIVER (164)view →
RNA1,478BLOOD_Leukemia (213)view →
shRNA
shRNA2,318SKIN (283)view →
CRISPR1,963BLOOD_Lymphoma (190)view →
RNA
RNA1,550LARGE_INTESTINE (530)view →
CRISPR773KIDNEY (144)view →