Cellular response to UV-A

associated omics data
GO:0071492Ontology (GO BP)GO biological process · ~11 member genes

Q-omics provides the Cellular response to UV-A (GO:0071492) pathway profile, scoring each patient from the combined activity of its roughly 11 member genes. Pathway activity is associated with patient survival in 24 of 34 cancer types, with the highest sampling consensus in BRCA. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 11, with the highest sampling consensus in HNSC. Additionally, pathway RNA activity shows 32,919 significant cross-omics associations, again with the highest sampling consensus in BRCA. Together, these results highlight BRCA, and HNSC as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Cellular response to UV-A survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (24). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier24BRCA (63)view →
GO function (Protein (mass-spec))Kaplan–Meier7COAD (24)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Cellular response to UV-A activity shows favorable associations in READ and COAD, but unfavorable associations in BRCA, KIRC, KICH and LGG. In the BRCA Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). BRCA ranks highest by sampling consensus for Cellular response to UV-A.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
BRCADFSTertileIII,IV0.7000.882<.00163view →
KIRCDFSQuartileAll0.5080.688<.00162view →
KICHDFSTertileIII,IV0.3171.000.00462view →
LGGOSMedianAll0.7160.893<.00152view →
READDFSTertileII,III,IV0.8890.695.00529view →
COADOSTertileIV0.8950.342.00725view →
Pink = unfavorable, green = favorable. all 24 lineages →

Cellular response to UV-A-BRCA (DFS)

Kaplan–Meier survival curve for Cellular response to UV-A pathway activity in BRCA: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Cellular response to UV-A tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 11 cancer types, while mass-spec protein activity shows differences in 7. The strongest signals are in HNSC for RNA and COAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot11HNSC (12)view →
GO function (Protein (mass-spec))Box plot7COAD (11)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows consistently higher tumor activity across HNSC, KIRC, COAD, READ, STAD and ESCA. In the HNSC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.199, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
HNSCFemaleIV+0.199<.00112view →
KIRCMaleIII,IV+0.065<.00111view →
COADAllIII,IV+0.118<.0019view →
READAllAll+0.151.0015view →
STADAllAll+0.076.0034view →
ESCAFemaleAll+0.196<.0012view →
Pink = higher activity in tumor. all 11 lineages →

Cellular response to UV-A-HNSC

Tumor-vs-normal pathway-activity box plot for Cellular response to UV-A in HNSC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with Cellular response to UV-A pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in BRCA. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in OESOPHAGUS.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA32,919BRCA (12103)view →
Protein (mass-spec)10,172LSCC (3831)view →
Protein (mass-spec)
Protein (mass-spec)19,577HNSC (4192)view →
RNA7,186UCEC (1946)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,601OESOPHAGUS (127)view →
shRNA1,144LARGE_INTESTINE (101)view →
RNA
RNA7,097SOFT_TISSUE (2910)view →
CRISPR2,089LIVER (160)view →
shRNA
RNA2,680BONE (1146)view →
shRNA2,310SKIN (299)view →
Protein (mass-spec)
Protein (mass-spec)1,106UPPER_AERODIGESTIVE_TRACT (614)view →
RNA865UPPER_AERODIGESTIVE_TRACT (158)view →