Nuclear export

associated omics data
GO:0051168Ontology (GO BP)GO biological process · ~168 member genes

Q-omics provides the Nuclear export (GO:0051168) pathway profile, scoring each patient from the combined activity of its roughly 168 member genes. Pathway activity is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in HNSC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 9, with the highest sampling consensus in KICH. Additionally, pathway RNA activity shows 37,026 significant cross-omics associations, again with the highest sampling consensus in UCEC. Together, these results highlight HNSC, KICH, and UCEC as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Nuclear export survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (22). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier22HNSC (103)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Nuclear export activity shows favorable associations in HNSC, SCLC and BRCA, but unfavorable associations in ACC, KIRC and LIHC. In the HNSC Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). HNSC ranks highest by sampling consensus for Nuclear export.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
HNSCDFSMedianII,III,IV0.4380.276<.001103view →
ACCDFSTertileAll0.2750.731<.00197view →
KIRCDFSMedianII,III,IV0.4240.629.00264view →
SCLCOSQuartileIII,IV0.8610.333.00363view →
LIHCOSMedianAll0.7050.833<.00162view →
BRCADFSQuartileIII,IV0.9490.793.00530view →
Pink = unfavorable, green = favorable. all 22 lineages →

Nuclear export-HNSC (DFS)

Kaplan–Meier survival curve for Nuclear export pathway activity in HNSC: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Nuclear export tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 9 cancer types. The strongest signals are in KICH for RNA.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot9KICH (10)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across LIHC and HNSC and lower tumor activity in KICH, KIRC, BRCA and THCA. In the KICH box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.061, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KICHFemaleAll−0.061<.00110view →
LIHCAllII,III,IV+0.036<.0019view →
HNSCAllAll+0.023<.0017view →
KIRCFemaleIV−0.034.0076view →
BRCAAllIII,IV−0.034<.0016view →
THCAAllAll−0.024<.0015view →
Pink = higher activity in tumor. all 9 lineages →

Nuclear export-KICH

Tumor-vs-normal pathway-activity box plot for Nuclear export in KICH.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with Nuclear export pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in UCEC. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in URINARY_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA37,026UCEC (24859)view →
Protein (mass-spec)8,601HNSC (2262)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,489URINARY_TRACT (184)view →
RNA1,899LIVER (419)view →
RNA
RNA12,481BLOOD_Lymphoma (5216)view →
CRISPR2,024BONE (229)view →
Protein (mass-spec)
RNA2,984BREAST (582)view →
Protein (mass-spec)2,318BONE (638)view →
shRNA
shRNA2,702BLOOD_Leukemia (384)view →
CRISPR1,673PANCREAS (164)view →