Purine ribonucleoside catabolic process

associated omics data
GO:0046130Ontology (GO BP)GO biological process · ~6 member genes

Q-omics provides the Purine ribonucleoside catabolic process (GO:0046130) pathway profile, scoring each patient from the combined activity of its roughly 6 member genes. Pathway activity is associated with patient survival in 25 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 4, with the highest sampling consensus in BRCA. Additionally, pathway RNA activity shows 33,108 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight ACC, BRCA, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Purine ribonucleoside catabolic process survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (25). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier25ACC (82)view →
GO function (Protein (mass-spec))Kaplan–Meier6PDAC (31)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Purine ribonucleoside catabolic process activity shows favorable associations in ACC, MESO and KICH, but unfavorable associations in LUAD, DLBC and SCLC. In the ACC Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). ACC ranks highest by sampling consensus for Purine ribonucleoside catabolic process.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCOSTertileII,III,IV0.9420.601<.00182view →
LUADOSMedianAll0.6090.738<.00177view →
MESODFSTertileAll0.4790.250<.00170view →
DLBCDFSQuartileAll0.0570.886<.00142view →
KICHDFSMedianAll0.9710.692.00138view →
SCLCOSQuartileAll0.2120.603.00230view →
Pink = unfavorable, green = favorable. all 25 lineages →

Purine ribonucleoside catabolic process-ACC (OS)

Kaplan–Meier survival curve for Purine ribonucleoside catabolic process pathway activity in ACC: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Purine ribonucleoside catabolic process tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 5 cancer types, while mass-spec protein activity shows differences in 5. The strongest signals are in COAD for RNA and COAD for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (Protein (mass-spec))Box plot5COAD (8)view →
GO function (RNA)Box plot4BRCA (8)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across LIHC and lower tumor activity in BRCA, COAD and READ. In the BRCA box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.062, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
BRCAAllIII,IV−0.062<.0018view →
COADAllAll−0.029<.0017view →
READAllAll−0.048.0032view →
LIHCAllAll+0.017.0241view →
Pink = higher activity in tumor. all 4 lineages →

Purine ribonucleoside catabolic process-BRCA

Tumor-vs-normal pathway-activity box plot for Purine ribonucleoside catabolic process in BRCA.

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Cross-omics associations

This table shows molecular features associated with Purine ribonucleoside catabolic process pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in UPPER_AERODIGESTIVE_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA33,108STAD (10807)view →
Protein (mass-spec)10,726GBM (4723)view →
Protein (mass-spec)
Protein (mass-spec)19,296LSCC (7690)view →
RNA9,478LSCC (6713)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,595UPPER_AERODIGESTIVE_TRACT (187)view →
RNA1,531SKIN (354)view →
RNA
RNA4,340BLOOD_Leukemia (1587)view →
CRISPR1,667UPPER_AERODIGESTIVE_TRACT (137)view →
Protein (mass-spec)
RNA1,719BLOOD_Leukemia (675)view →
shRNA679STOMACH (118)view →
shRNA
shRNA1,452SKIN (147)view →
CRISPR1,345PANCREAS (130)view →