Dicarboxylic acid catabolic process

associated omics data
GO:0043649Ontology (GO BP)GO biological process · ~19 member genes

Q-omics provides the Dicarboxylic acid catabolic process (GO:0043649) pathway profile, scoring each patient from the combined activity of its roughly 19 member genes. Pathway activity is associated with patient survival in 22 of 34 cancer types, with the highest sampling consensus in MESO. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 12, with the highest sampling consensus in LUSC. Additionally, pathway RNA activity shows 34,825 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight MESO, LUSC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Dicarboxylic acid catabolic process survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (22). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier22MESO (67)view →
GO function (Protein (mass-spec))Kaplan–Meier6HNSC (6)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Dicarboxylic acid catabolic process activity shows favorable associations in MESO, ACC, LGG, KIRP and HNSC, but unfavorable associations in ESCA. In the MESO Kaplan–Meier curve the low-activity group declines faster, consistent with the favorable association (log-rank p < 0.001). MESO ranks highest by sampling consensus for Dicarboxylic acid catabolic process.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
MESOOSTertileAll0.5030.190<.00167view →
ACCOSQuartileII,III,IV0.8120.256.00154view →
ESCADFSMedianAll0.3040.478.00338view →
LGGOSMedianAll0.8730.761<.00137view →
KIRPOSTertileII,III,IV0.8450.225.01323view →
HNSCDFSQuartileIV0.7500.373.01220view →
Pink = unfavorable, green = favorable. all 22 lineages →

Dicarboxylic acid catabolic process-MESO (OS)

Kaplan–Meier survival curve for Dicarboxylic acid catabolic process pathway activity in MESO: high vs low activity groups.

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Tumor vs Normal activity

This table summarizes Dicarboxylic acid catabolic process tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 12 cancer types, while mass-spec protein activity shows differences in 7. The strongest signals are in LUSC for RNA and CCRCC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot12LUSC (9)view →
GO function (Protein (mass-spec))Box plot7CCRCC (10)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across THCA and lower tumor activity in LUSC, KIRC, KIRP, BRCA and LUAD. In the LUSC box plot, normal samples show higher pathway activity than tumor samples (log2 FC = −0.060, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
LUSCFemaleII,III,IV−0.060<.0019view →
KIRCMaleAll−0.037<.0018view →
KIRPAllIV−0.104.0017view →
THCAFemaleII,III,IV+0.037<.0017view →
BRCAAllII,III,IV−0.060<.0016view →
LUADFemaleAll−0.031<.0016view →
Pink = higher activity in tumor. all 12 lineages →

Dicarboxylic acid catabolic process-LUSC

Tumor-vs-normal pathway-activity box plot for Dicarboxylic acid catabolic process in LUSC.

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Cross-omics associations

This table shows molecular features associated with Dicarboxylic acid catabolic process pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in LUNG_NSCLC_LUAD.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA34,825STAD (13698)view →
Protein (mass-spec)11,967GBM (3197)view →
Protein (mass-spec)
Protein (mass-spec)16,340GBM (5358)view →
RNA5,843GBM (3547)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,900LUNG_NSCLC_LUAD (147)view →
RNA1,691SKIN (286)view →
RNA
RNA5,871CNS (1512)view →
CRISPR1,938SKIN (144)view →
Protein (mass-spec)
Protein (mass-spec)2,108LUNG_NSCLC_LUAD (480)view →
RNA1,776LUNG_SCLC (328)view →
shRNA
shRNA1,827LUNG_NSCLC_LUAD (191)view →
RNA1,740BLOOD_Leukemia (290)view →