Obsolete regulation of response to extracellular stimulus

pathway activity — cross-omics
GO:0032104Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete regulation of response to extracellular stimulus pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TLN2, ZNRF2_S82, and ASXL2_S571, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCTLN2 →+0.505+0.055<.001<.00135
UCECZNRF2_S82 →+0.531+0.057<.001.00135
UCECASXL2_S571 →+0.388+0.070<.001<.00134
GBMBRPF1_S891 →+0.484+0.060<.001<.00134
GBMIGFBP2 →-0.865-0.065<.001<.00134
HNSCRPL5 →-0.169-0.037<.001.00234
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration