Neuroblast proliferation

associated omics data
GO:0007405Ontology (GO BP)GO biological process · ~80 member genes

Q-omics provides the Neuroblast proliferation (GO:0007405) pathway profile, scoring each patient from the combined activity of its roughly 80 member genes. Pathway activity is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in LGG. Among the 18 cancer types available for tumor–normal comparison, the pathway is differentially active in 10, with the highest sampling consensus in KIRC. Additionally, pathway RNA activity shows 36,476 significant cross-omics associations, again with the highest sampling consensus in STAD. Together, these results highlight LGG, KIRC, and STAD as cancer lineages where the pathway shows reproducible signals across outcome, tissue activity, and molecular association analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns. Pathway-against-pathway and pathway-against-mutation comparisons are not available for ontology entities.

Survival associations

This table summarizes Neuroblast proliferation survival associations by molecular data type. RNA-level pathway activity shows survival associations in the most cancer types (20). The rightmost column indicates the cancer type with the highest sampling consensus for each layer.
Data typeSurvival analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Kaplan–Meier20LGG (49)view →
GO function (Protein (mass-spec))Kaplan–Meier5LUAD (22)view →
This table ranks reproducible pathway activity–survival associations across cancer types. High Neuroblast proliferation activity shows unfavorable associations in LGG, COAD, ACC, LIHC, PAAD and UVM. In the LGG Kaplan–Meier curve the high-activity group declines faster, consistent with the unfavorable association (log-rank p < 0.001). LGG ranks highest by sampling consensus for Neuroblast proliferation.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
LGGOSMedianAll0.7300.854<.00149view →
COADDFSTertileII,III,IV0.6570.806.00246view →
ACCOSMedianAll0.2900.768<.00140view →
LIHCDFSTertileAll0.3040.464<.00138view →
PAADDFSMedianAll0.1440.373.00628view →
UVMDFSTertileAll0.3030.820.00520view →
Pink = unfavorable, green = favorable. all 20 lineages →

Neuroblast proliferation-LGG (OS)

Kaplan–Meier survival curve for Neuroblast proliferation pathway activity in LGG: high vs low activity groups.

Explore this curve interactively →

Tumor vs Normal activity

This table summarizes Neuroblast proliferation tumor–normal activity differences by data type. RNA-level activity shows significant tumor–normal differences in 10 cancer types, while mass-spec protein activity shows differences in 4. The strongest signals are in KIRC for RNA and PDAC for protein.
Data typeActivity analysisLineage consensusLineage of highest sampling consensus
GO function (RNA)Box plot10KIRC (10)view →
GO function (Protein (mass-spec))Box plot4PDAC (7)view →
This table ranks reproducible tumor–normal activity differences for the pathway. A positive fold-change indicates higher activity in tumor tissue. The pathway shows higher tumor activity across KIRC, KIRP and HNSC and lower tumor activity in LUAD, LUSC and BRCA. In the KIRC box plot, tumor samples show higher pathway activity than matched normal samples (log2 FC = +0.029, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
KIRCMaleAll+0.029<.00110view →
LUADFemaleII,III,IV−0.046<.0017view →
LUSCFemaleAll−0.041<.0016view →
BRCAAllAll−0.020<.0016view →
KIRPAllAll+0.019.0034view →
HNSCAllII,III,IV+0.015.0054view →
Pink = higher activity in tumor. all 10 lineages →

Neuroblast proliferation-KIRC

Tumor-vs-normal pathway-activity box plot for Neuroblast proliferation in KIRC.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with Neuroblast proliferation pathway activity in patient tissues and cancer cell lines. In patient samples, pathway activity is most strongly linked to RNA and protein features, with the largest associated set in STAD. In cancer cell lines, RNA-expression features and functional dependencies dominate, with the largest set in UPPER_AERODIGESTIVE_TRACT.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA36,476STAD (23839)view →
Protein (mass-spec)10,752PDAC (2359)view →
Protein (mass-spec)
Protein (mass-spec)12,994GBM (2376)view →
RNA3,580PDAC (1370)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR1,914UPPER_AERODIGESTIVE_TRACT (197)view →
RNA1,753URINARY_TRACT (174)view →
RNA
RNA4,600BLOOD_Leukemia (1286)view →
CRISPR2,011BLOOD_Leukemia (178)view →
Protein (mass-spec)
RNA1,858KIDNEY (242)view →
CRISPR1,764KIDNEY (176)view →
shRNA
shRNA1,410SOFT_TISSUE (218)view →
CRISPR1,296OESOPHAGUS (165)view →