VPREB3

associated omics data
V-set pre-B cell surrogate light chain 3Genealiases: 8HS20 · N27C7-2

Q-omics provides the consensus-scored VPREB3 profile across patient tissues and cancer cell-line models. VPREB3 expression is associated with patient survival in 20 of 34 cancer types, with the highest sampling consensus in ACC. Among the 18 cancer types available for tumor–normal comparison, VPREB3 is differentially expressed in 12, with the highest sampling consensus in COAD. Additionally, VPREB3 RNA expression shows 13,103 significant gene co-expression associations, with the highest sampling consensus in TGCT. Together, these results highlight ACC, COAD, and TGCT as cancer lineages where VPREB3 shows reproducible signals across survival, tumor–normal expression, and patient cross-omics analyses.

Every result is evaluated using two consensus scores. Sampling consensus measures how consistently a finding is reproduced within a cancer lineage across different conditions. Lineage consensus measures how broadly the result is shared across cancer types, distinguishing pan-cancer signals from lineage-specific patterns.

Survival associations

This table summarizes VPREB3 survival associations across molecular data types. VPREB3 RNA expression shows survival associations in the most cancer types (20), followed by mass-spec protein abundance (2). The rightmost column indicates the cancer type with the highest sampling consensus for each molecular layer.
VPREB3 data typeSurvival analysisLineage consensusLineage of highest sampling consensus
RNAKaplan–Meier20ACC (94)view →
Protein (mass-spec)Kaplan–Meier2LSCC (10)view →
This table ranks reproducible VPREB3 RNA expression–survival associations across cancer types. High VPREB3 expression shows unfavorable associations in ACC and LGG, but favorable associations in HNSC, ESCA, SKCM and CESC. The ACC Kaplan–Meier curve shows clear separation, with the high-expression group declining faster, consistent with the unfavorable association (log-rank p < 0.001). Together, the overview and detailed table identify ACC as the clearest survival context for VPREB3 RNA expression.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
ACCDFSMedianAll0.2580.676<.00194view →
HNSCDFSQuartileIII,IV0.7490.559<.00177view →
ESCAOSMedianAll0.8090.593.00153view →
LGGOSMedianAll0.7320.877<.00148view →
SKCMOSMedianAll0.8320.729<.00146view →
CESCDFSQuartileAll0.8450.630<.00144view →
Pink = unfavorable, green = favorable. all 20 lineages →

VPREB3-ACC (DFS)

Kaplan–Meier survival curve for VPREB3 RNA expression in ACC: high vs low expression groups.

Explore this curve interactively →

Tumor vs Normal expression

This table summarizes VPREB3 tumor–normal expression differences by data type. RNA shows broader differences across cancer types, with a lineage consensus of 12, while mass-spec protein shows differences in 2. The strongest signals are observed in COAD for RNA and LUAD for protein.
VPREB3 data typeExpression analysisLineage consensusLineage of highest sampling consensus
RNABox plot12COAD (11)view →
Protein (mass-spec)Box plot2LUAD (4)view →
This table ranks reproducible tumor–normal expression differences for VPREB3. A negative fold-change indicates higher expression in normal tissue than in tumor tissue. VPREB3 shows lower tumor expression in COAD, BLCA and THCA and higher tumor expression in LUAD, UCEC and BRCA. The COAD box plot shows higher VPREB3 RNA expression in normal versus tumor tissue (log2 FC = −2.202, t-test p < 0.001).
LineageGenderStageFold-changepSampling consensus
COADFemaleIII,IV−2.202<.00111view →
LUADFemaleAll+1.756<.0018view →
BLCAFemaleIII,IV−2.060.0204view →
THCAAllAll−1.063.0024view →
UCECAllAll+0.703.0104view →
BRCAFemaleAll+0.413.0024view →
Green = repressed in tumor. all 12 lineages →

VPREB3-COAD

Tumor-vs-normal expression box plot for VPREB3 in COAD.

Explore this plot interactively →

Cross-omics associations

This table shows molecular features associated with VPREB3 in patient tissues and cancer cell lines. In patient samples, VPREB3 shows the broadest associations at the RNA and protein expression levels, with TGCT recurring as the lineage with the largest associated feature set. In cancer cell lines, VPREB3 RNA and mutation anchors are most strongly linked to RNA-expression features, especially in LUNG_NSCLC_LUAD, while CRISPR and shRNA rows add functional-dependency signals in OVARY and BLOOD_Lymphoma.
Associated data typeStrength (# associated data)Lineage of highest associated data
RNA
RNA13,103TGCT (3886)view →
Protein (mass-spec)11,117LSCC (3489)view →
Protein (mass-spec)
RNA179LUAD (176)view →
Protein (mass-spec)77LUAD (69)view →
Mutation
RNA30UCEC (17)view →
Infiltrating cells1UCEC (1)view →
Associated data typeStrength (# associated data)Lineage of highest associated data
CRISPR
CRISPR2,043LUNG_NSCLC_LUAD (178)view →
RNA1,581OVARY (357)view →
RNA
RNA9,676BLOOD_Lymphoma (4598)view →
Function (RNA)4,654BLOOD_Lymphoma (2318)view →
shRNA
RNA1,396URINARY_TRACT (202)view →
shRNA1,247KIDNEY (194)view →
Mutation
Mutation565BLOOD_Leukemia (565)view →