UBA7

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, UBA7 mutation is significantly associated with the RNA expression of many other genes, with 74 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible UBA7-associated genes across cancer lineages are USP17L11, USP17L20, and USP17L18. Each is linked with UBA7 in more than 1 cancer types. Because this analysis shows association rather than direction, both UBA7-to-partner and partner-to-UBA7 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, USP17L11 grouped by UBA7-low versus UBA7-high in BLOOD_Leukemia.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (UBA7→partner) and Y-score (partner→UBA7) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaUSP17L11 →+0.012+3.684<.001<.00132
BLOOD_LeukemiaUSP17L20 →+0.003+3.802<.001.00132
BLOOD_LeukemiaUSP17L18 →+0.003+3.802<.001.00132
KIDNEYCEBPE →+0.007+4.491<.001.00231
SOFT_TISSUEKLK12 →+0.821+4.930<.001.00831
SOFT_TISSUEDYTN →+0.016+5.977<.001.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 74 associations by consensus.

USP17L11 by UBA7 expression — BLOOD_Leukemia

Box plot of USP17L11 in UBA7-low vs UBA7-high samples in BLOOD_Leukemia.

Explore this box plot interactively →

Exploration