TXNDC12

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, TXNDC12 protein abundance is significantly associated with the RNA expression of many other genes, with 11,419 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TXNDC12-associated genes across cancer lineages are ABCG2, CIPC, and GNL2. Each is linked with TXNDC12 in more than 4 cancer types. Because this analysis shows association rather than direction, both TXNDC12-to-partner and partner-to-TXNDC12 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TXNDC12 versus ABCG2 in CCRCC, with a Pearson correlation of -0.40.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (TXNDC12→partner) and Y-score (partner→TXNDC12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCABCG2 →-1.377-0.223<.001<.00135
BRCACIPC →-0.543-0.233<.001<.00135
UCECGNL2 →+0.474+0.240.005.00134
BRCAKIF2C →+1.166+0.412<.001<.00134
BRCACOA7 →+0.587+0.376<.001<.00134
CCRCCCGRRF1 →-0.414-0.216<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,419 associations by consensus.

TXNDC12 vs ABCG2 — CCRCC

Per-sample scatter of TXNDC12 vs ABCG2 in CCRCC (Pearson r = -0.40).

Explore this scatter interactively →

Exploration