TTC39A-AS1

Across TCGA patient cohorts, TTC39A-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,054 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible TTC39A-AS1-associated proteins across cancer lineages are TTC39A, LRBA, and ARFGEF3. Each is linked with TTC39A-AS1 in more than 7 cancer types. Because this analysis shows association rather than direction, both TTC39A-AS1-to-partner and partner-to-TTC39A-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TTC39A-AS1 versus TTC39A in OV, with a Pearson correlation of 0.51.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TTC39A-AS1→partner) and Y-score (partner→TTC39A-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	TTC39A →	+1.219	+0.412	<.001	<.001	3	8
BRCA	LRBA →	+0.508	+0.939	<.001	<.001	3	7
BRCA	ARFGEF3 →	+0.841	+1.107	<.001	<.001	3	5
OV	PICK1 →	+0.516	+0.396	<.001	<.001	3	5
LSCC	PLS1 →	+0.586	+0.300	<.001	.001	3	5
BRCA	PDXDC1 →	+0.533	+1.012	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 11,054 associations by consensus.

TTC39A-AS1 vs TTC39A — OV

Explore this scatter interactively →