TSPAN9-IT1

Across TCGA patient cohorts, TSPAN9-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 4,690 significant associations in total. GBM shows the largest number of these associations.

The most reproducible TSPAN9-IT1-associated proteins across cancer lineages are TSPAN9, LRP1, and RECQL. Each is linked with TSPAN9-IT1 in more than 2 cancer types. Because this analysis shows association rather than direction, both TSPAN9-IT1-to-partner and partner-to-TSPAN9-IT1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, TSPAN9-IT1 versus TSPAN9 in UCEC, with a Pearson correlation of 0.30.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (TSPAN9-IT1→partner) and Y-score (partner→TSPAN9-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
UCEC	TSPAN9 →	+0.400	+0.937	.002	<.001	3	3
HNSC	LRP1 →	+0.249	+0.548	<.001	.001	3	3
GBM	RECQL →	+0.286	+0.647	.005	<.001	3	3
OV	MYO9B_S1281 →	+1.398	+0.063	.006	.004	3	2
GBM	YTHDC1_S424 →	+0.346	+0.388	.002	.005	3	2
LSCC	ZRANB2_S188 →	+0.766	+0.447	.001	.001	3	2

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,690 associations by consensus.

TSPAN9-IT1 vs TSPAN9 — UCEC

Explore this scatter interactively →